Evidence map›Paper›PMID 27789713›Full record

ArticleThe Journal of biological chemistry2016

Role of FAST Kinase Domains 3 (FASTKD3) in Post-transcriptional Regulation of Mitochondrial Gene Expression.

Erik Boehm, María Zornoza, Alexis A Jourdain, Aitor Delmiro Magdalena, Inés García-Consuegra, Rebeca Torres Merino, Antonio Orduña, Miguel A Martín, Jean-Claude Martinou, Miguel A De la Fuente and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. How RNases Shape Mitochondrial Transcriptomes.International journal of molecular sciences · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Human Mitochondrial RNA Processing and Modifications: Overview.International journal of molecular sciences · 2021
    Review
  19. Mechanisms and regulation of protein synthesis in mitochondria.Nature reviews. Molecular cell biology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Erik BoehmFrom the Department of Cell Biology, University of Geneva, 1211 Genève 4, Switzerland.
María Zornozathe Departamento de Biología, Histología y Farmacología, Universidad de Valladolid, Instituto de Biología y Genética Molecular, Valladolid 47003, Spain.
Alexis A JourdainFrom the Department of Cell Biology, University of Geneva, 1211 Genève 4, Switzerland.
Aitor Delmiro MagdalenaInstituto de Investigación, Hospital Universitario 12 de Octubre (i+12), Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), U723, Madrid 28041, Spain.
Inés García-ConsuegraInstituto de Investigación, Hospital Universitario 12 de Octubre (i+12), Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), U723, Madrid 28041, Spain.
Rebeca Torres Merinothe Departamento de Biología, Histología y Farmacología, Universidad de Valladolid, Instituto de Biología y Genética Molecular, Valladolid 47003, Spain.
Antonio Orduñathe Departamento de Microbiología, Facultad de Medicina, Edificio de Ciencias de la Salud, Valladolid 47005, Spain, and.
Miguel A MartínInstituto de Investigación, Hospital Universitario 12 de Octubre (i+12), Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), U723, Madrid 28041, Spain.
Jean-Claude MartinouFrom the Department of Cell Biology, University of Geneva, 1211 Genève 4, Switzerland.
Miguel A De la Fuentethe Departamento de Biología, Histología y Farmacología, Universidad de Valladolid, Instituto de Biología y Genética Molecular, Valladolid 47003, Spain.
María Simarrothe Departamento de Microbiología, Facultad de Medicina, Edificio de Ciencias de la Salud, Valladolid 47005, Spain, and maria.simarro.grande@uva.es.
Centre for Biomedical Network Research on Rare Diseases · ESInstituto de Biomedicina y Genética Molecular de Valladolid · ESUniversity of Geneva · CHDepartamento de Salud · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Fas-activated serine/threonine kinase (FASTK) family of proteins has recently emerged as a central regulator of mitochondrial gene expression through the function of an unusual RNA-binding domain named RAP (for RNA-binding domain abundant in Apicomplexans), shared by all six members of the family. Here we describe the role of one of the less characterized members, FASTKD3, in mitochondrial RNA metabolism. First, we show that, in contrast to FASTK, FASTKD2, and FASTKD5, FASTKD3 does not localize in mitochondrial RNA granules, which are sites of processing and maturation of mtRNAs and ribosome biogenesis. Second, we generated FASTKD3 homozygous knock-out cell lines by homologous recombination and observed that the absence of FASTKD3 resulted in increased steady-state levels and half-lives of a subset of mature mitochondrial mRNAs: ND2, ND3, CYTB, COX2, and ATP8/6. No aberrant processing of RNA precursors was observed. Rescue experiments demonstrated that RAP domain is required for FASTKD3 function in mRNA stability. Besides, we describe that FASTKD3 is required for efficient COX1 mRNA translation without altering mRNA levels, which results in a decrease in the steady-state levels of COX1 protein. This finding is associated with reduced mitochondrial complex IV assembly and activity. Our observations suggest that the function of this family of proteins goes beyond RNA processing and ribosome assembly and includes RNA stability and translation regulation within mitochondria.

Indexed as

Cell Line, TumorCyclooxygenase 1Electron Transport Complex IVGene Expression RegulationHumansMitochondriaMitochondrial ProteinsProtein Serine-Threonine KinasesRNARNA, MessengerRNA, MitochondrialRNA StabilityCyclooxygenase 1Electron Transport Complex IVFASTKD3 protein, humanMitochondrial ProteinsProtein Serine-Threonine KinasesPTGS1 protein, humanRNARNA, MessengerRNA, MitochondrialFASTKD3gene expressionmitochondriapost-transcriptional regulationRNARNA metabolismtranslationtranslation control

Identifiers

PMID27789713
PMCPMC5207062
OpenAlexW2542159297

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.