Evidence map›Paper›PMID 27789708›Full record

ArticleThe Journal of biological chemistry2016

In Vitro Activity of a Purified Natural Anion Channelrhodopsin.

Hai Li, Oleg A Sineshchekov, Gang Wu, John L Spudich

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hai LiFrom the Center for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center, McGovern Medical School, Houston, Texas 77030 and.
Oleg A SineshchekovFrom the Center for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center, McGovern Medical School, Houston, Texas 77030 and.
Gang WuFrom the Center for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center, McGovern Medical School, Houston, Texas 77030 and.
John L SpudichFrom the Center for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center, McGovern Medical School, Houston, Texas 77030 and john.l.spudich@uth.tmc.edu.
The University of Texas Health Science Center at Houston · US

Funding

Structure/Function of Microbial Sensory RhodopsinsR01GM027750 · NIGMS · YESHIVA UNIVERSITY · PI SPUDICH, JOHN LEE · 1985 to 2020
$6.6M
NIGMS NIH HHS R01 GM027750
6 · The paper itself

Abstract

Natural anion channelrhodopsins (ACRs) recently discovered in cryptophyte algae are the most active rhodopsin channels known. They are of interest both because of their unique natural function of light-gated chloride conductance and because of their unprecedented efficiency of membrane hyperpolarization for optogenetic neuron silencing. Light-induced currents of ACRs have been studied in HEK cells and neurons, but light-gated channel conductance of ACRs in vitro has not been demonstrated. Here we report light-induced chloride channel activity of a purified ACR protein reconstituted in large unilamellar vesicles (LUVs). EPR measurements establish that the channels are inserted uniformly "inside-out" with their cytoplasmic surface facing the medium of the LUV suspension. We show by time-resolved flash spectroscopy that the photochemical reaction cycle of a functional purified ACR from Guillardia theta (GtACR1) in LUVs exhibits similar spectral shifts, indicating similar photocycle intermediates as GtACR1 in detergent micelles. Furthermore, the photocycle rate is dependent on electric potential generated by chloride gradients in the LUVs in the same manner as in voltage-clamped animal cells. We confirm with this system that, in contrast to cation-conducting channelrhodopsins, opening of the channel occurs prior to deprotonation of the Schiff base. However, the photointermediate transitions in the LUVs exhibit faster kinetics. The ACR-incorporated LUVs provide a purified defined system amenable to EPR, optical and vibrational spectroscopy, and fluorescence resonance energy transfer measurements of structural changes of ACRs with the molecules in a demonstrably functional state.

Indexed as

CryptophytaHEK293 CellsHumansLiposomesPlant ProteinsRhodopsinLiposomesPlant ProteinsRhodopsinchloride channelelectron paramagnetic resonance (EPR)flash photolysislipid vesicleLUVmembrane reconstitutionphotoreceptorretinal protein

Identifiers

PMID27789708
PMCPMC5207235
OpenAlexW2540771181

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.