Evidence map›Paper›PMID 27789543›Full record

ArticleInfection and immunity2017

A Nonsense Mutation in Mycobacterium marinum That Is Suppressible by a Novel Mechanism.

Emily A Williams, Felix Mba Medie, Rachel E Bosserman, Benjamin K Johnson, Cristal Reyna, Micah J Ferrell, Matthew M Champion, Robert B Abramovitch, Patricia A Champion

Abstract read
In one paragraph

Article in Infection and immunity, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Tyloxapol inhibits ESX-1 secretion inJournal of bacteriology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Proteo-genetic analysis reveals clear hierarchy of ESX-1 secretion inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Review
  9. Modeling Tubercular ESX-1 Secretion Using Mycobacterium marinum.Microbiology and molecular biology reviews : MMBR · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. WhiB6 regulation of ESX-1 gene expression is controlled by a negative feedback loop inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Emily A WilliamsDepartment of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, USA.
Felix Mba MedieDepartment of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, USA.
Rachel E BossermanDepartment of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, USA.
Benjamin K JohnsonDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Cristal ReynaDepartment of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, USA.
Micah J FerrellDepartment of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, USA.
Matthew M ChampionDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana, USA.
Robert B AbramovitchDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Patricia A ChampionDepartment of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, USA pchampio@nd.edu.

Funding

Role of N-alpha acetylation in mycobacterial secretion and virulenceR01AI106872 · NIAID · UNIVERSITY OF NOTRE DAME · PI CHAMPION, PATRICIA A · 2013 to 2024
$4.2M
Mechanisms of Mycobacterium Tuberculosis pH-driven AdaptationR01AI116605 · NIAID · MICHIGAN STATE UNIVERSITY · PI ABRAMOVITCH, ROBERT B · 2016 to 2020
$1.9M
NIAID NIH HHS R01 AI106872NIAID NIH HHS R01 AI116605
6 · The paper itself

Abstract

Mycobacterial pathogens use the ESAT-6 system 1 (Esx-1) exporter to promote virulence. Previously, we used gene disruption and complementation to conclude that the MMAR_0039 gene in Mycobacterium marinum is required to promote Esx-1 export. Here we applied molecular genetics, proteomics, and whole-genome sequencing to demonstrate that the MMAR_0039 gene is not required for Esx-1 secretion or virulence. These findings suggest that we initially observed an indirect mechanism of genetic complementation. We identified a spontaneous nonsense mutation in a known Esx-1-associated gene which causes a loss of Esx-1 activity. We show that the Esx-1 function was restored by nonsense suppression. Moreover, we identified a polar mutation in the ppsC gene which reduced cellular impermeability but did not impact cytotoxicity in macrophages. Our studies reveal insight into Esx-1 export, nonsense suppression, and cell envelope lipid biogenesis.

Indexed as

Codon, NonsenseGene Expression Regulation, BacterialAmino Acid SequenceBacterial ProteinsBase SequenceMycobacterium Infections, NontuberculousMycobacterium marinumPhenotypeProtein TransportVirulenceBacterial ProteinsCodon, NonsensecomplementationEsx-1mycobacterianonsense suppressionPDIMspontaneous mutation

Identifiers

PMID27789543
PMCPMC5278160

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.