Evidence map›Paper›PMID 27789522›Full record

ArticleThe EMBO journal2016

A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit β5i.

Eva M Huber, Wolfgang Heinemeyer, Gerjan de Bruin, Herman S Overkleeft, Michael Groll

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Article in The EMBO journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  14. High-resolution cryo-EM proteasome structures in drug development.Acta crystallographica. Section D, Structural biology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eva M HuberCenter for Integrated Protein Science at the Department Chemie, Lehrstuhl für Biochemie Technische Universität München, Garching, Germany.
Wolfgang HeinemeyerCenter for Integrated Protein Science at the Department Chemie, Lehrstuhl für Biochemie Technische Universität München, Garching, Germany.
Gerjan de BruinGorlaeus Laboratories, Leiden Institute of Chemistry and Netherlands Proteomics Center, CC Leiden, the Netherlands.
Herman S OverkleeftGorlaeus Laboratories, Leiden Institute of Chemistry and Netherlands Proteomics Center, CC Leiden, the Netherlands.
Michael GrollCenter for Integrated Protein Science at the Department Chemie, Lehrstuhl für Biochemie Technische Universität München, Garching, Germany michael.groll@tum.de.ORCID 0000-0002-1660-340X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inhibition of the immunoproteasome subunit β5i alleviates autoimmune diseases in preclinical studies and represents a promising new anti-inflammatory therapy. However, the lack of structural data on the human immunoproteasome still hampers drug design. Here, we systematically determined the potency of seven α' β' epoxyketone inhibitors with varying N-caps and P3-stereochemistry for mouse/human β5c/β5i and found pronounced differences in their subunit and species selectivity. Using X-ray crystallography, the compounds were analyzed for their modes of binding to chimeric yeast proteasomes that incorporate key parts of human β5c, human β5i or mouse β5i and the neighboring β6 subunit. The structural data reveal exceptional conformations for the most selective human β5i inhibitors and highlight subtle structural differences as the major reason for the observed species selectivity. Altogether, the presented results validate the humanized yeast proteasome as a powerful tool for structure-based development of β5i inhibitors with potential clinical applications.

Indexed as

AnimalsCrystallography, X-RayEnzyme InhibitorsHumansMiceProteasome Endopeptidase ComplexProtein BindingRecombinant ProteinsSaccharomyces cerevisiaeEnzyme InhibitorsLMP7 proteinProteasome Endopeptidase ComplexRecombinant Proteinsimmunoproteasomeligandmode of actionspecies selectivityX‐ray crystallography

Identifiers

PMID27789522
PMCPMC5283606

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.