Evidence map›Paper›PMID 27789272›Full record

ArticleEBioMedicine2016

Lessons from the Crystal Structure of the S. aureus Surface Protein Clumping Factor A in Complex With Tefibazumab, an Inhibiting Monoclonal Antibody.

Vannakambadi K Ganesh, Xiaowen Liang, Joan A Geoghegan, Ana Luisa V Cohen, Nagarajan Venugopalan, Timothy J Foster, Magnus Hook

Open access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 47 citations in OpenAlex.

  1. Monoclonal Antibodies Targeting Bacterial Infections: A Broad Review of the Field.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. The Two-Track Investigation of Fibronectin Binding Protein A ofInternational journal of molecular sciences · 2023
    Article
  7. Review
  8. Adhesive Virulence Factors ofACS bio & med chem Au · 2022
    Article
  9. Review
  10. Article
  11. Article
  12. Engineered human antibodies for the opsonization and killing ofProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Surface Proteins ofMicrobiology spectrum · 2019
    Review
  19. Article
  20. Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Vannakambadi K GaneshCenter for Infectious and Inflammatory Diseases, Institute of Biosciences and Technology, Texas A & M University Health Science Center, 2121 W Holcombe Blvd., Houston, TX 77030, USA.
Xiaowen LiangCenter for Infectious and Inflammatory Diseases, Institute of Biosciences and Technology, Texas A & M University Health Science Center, 2121 W Holcombe Blvd., Houston, TX 77030, USA.
Joan A GeogheganDepartment of Microbiology, Moyne Institute of Preventive Medicine, School of Genetics and Microbiology, Trinity College Dublin, Dublin 2, Ireland.
Ana Luisa V CohenCenter for Infectious and Inflammatory Diseases, Institute of Biosciences and Technology, Texas A & M University Health Science Center, 2121 W Holcombe Blvd., Houston, TX 77030, USA.
Nagarajan VenugopalanGM/CA@APS, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, IL 60439, USA.
Timothy J FosterDepartment of Microbiology, Moyne Institute of Preventive Medicine, School of Genetics and Microbiology, Trinity College Dublin, Dublin 2, Ireland.
Magnus HookCenter for Infectious and Inflammatory Diseases, Institute of Biosciences and Technology, Texas A & M University Health Science Center, 2121 W Holcombe Blvd., Houston, TX 77030, USA. Electronic address: mhook@ibt.tamhsc.edu.
Trinity College Dublin · IEArgonne National Laboratory · US

Funding

BINDING OF BACTERIA TO FIBRONECTIN AN FIBRINOGENR01AI020624 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI HOOK, AXEL MAGNUS · 1985 to 2020
$9.7M
Molecular binding reaction that initiates Staphylococcus aureus infections of carR01HL119648 · NHLBI · OHIO STATE UNIVERSITY · PI LOWER, STEVEN K · 2014 to 2018
$3.0M
Analysis of Staphylococcus Aureus Host InteractionsR56AI020624 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI GANESH, VANNAKAMBADI, HOOK, AXEL MAGNUS · 2016 to 2016
$476k
NHLBI NIH HHS R01 HL119648NIAID NIH HHS R01 AI020624NIAID NIH HHS R56 AI020624
6 · The paper itself

Abstract

The Staphylococcus aureus fibrinogen binding MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules), ClfA (clumping factor A) is an important virulence factor in staphylococcal infections and a component of several vaccines currently under clinical evaluation. The mouse monoclonal antibody aurexis (also called 12-9), and the humanized version tefibazumab are therapeutic monoclonal antibodies targeting ClfA that in combination with conventional antibiotics were effective in animal models but showed less impressive efficacy in a limited Phase II clinical trial. We here report the crystal structure and a biochemical characterization of the ClfA/tefibazumab (Fab) complex. The epitope for tefibazumab is located to the "top" of the N3 subdomain of ClfA and partially overlaps with a previously unidentified second binding site for fibrinogen. A high-affinity binding of ClfA to fibrinogen involves both an interaction at the N3 site and the previously identified docking of the C-terminal segment of the fibrinogen γ-chain in the N2N3 trench. Although tefibazumab binds ClfA with high affinity we observe a modest IC

Indexed as

Models, MolecularProtein ConformationAmino Acid SubstitutionAntibodies, MonoclonalBinding SitesCoagulaseCrystallography, X-RayEpitopesFibrinogenHumansImmunoglobulin Fab FragmentsProtein BindingProtein Interaction Domains and MotifsRecombinant ProteinsAntibodies, MonoclonalClfA protein, Staphylococcus aureusCoagulaseEpitopesFibrinogenImmunoglobulin Fab FragmentsRecombinant ProteinsAurexisClumping factor AFibrinogenStaphylococcal infectionsTefibazumabTherapeutic mAb

Identifiers

PMID27789272
PMCPMC5264652
OpenAlexW2529238068

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.