Evidence map›Paper›PMID 27786282›Full record

ArticleScientific reports2016

Cristae remodeling causes acidification detected by integrated graphene sensor during mitochondrial outer membrane permeabilization.

Ted D Pham, Phi Q Pham, Jinfeng Li, Anthony G Letai, Douglas C Wallace, Peter J Burke

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Frontiers in immunology · 2024
    Article
  7. How defective mitochondrial electrical activity leads to inherited blindness.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Mitochondrial genetic medicine.Nature genetics · 2018
    Review
  14. Scanning Microwave Microscopy of Vital Mitochondria in Respiration Buffer.IEEE MTT-S International Microwave Symposium digest. IEEE MTT-S International Microwave Symposium · 2018
    Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ted D PhamDepartment of Biomedical Engineering, University of California, Irvine, CA, USA.
Phi Q PhamDepartment of Chemical Engineering and Materials Science, University of California, Irvine, CA, USA.
Jinfeng LiDepartment of Chemical Engineering and Materials Science, University of California, Irvine, CA, USA.
Anthony G LetaiDana-Farber Cancer Institute, Harvard University, Boston, MA, USA.
Douglas C WallaceCenter for Mitochondrial and Epigenomic Medicine, Children's Hospital of Philadelphia and Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Peter J BurkeDepartment of Biomedical Engineering, University of California, Irvine, CA, USA.
University of California, Irvine · USChildren's Hospital of Philadelphia · USHarvard University · US

Funding

MITOCHONDRIAL INBORN ERRORS OF METABOLISMR01NS021328 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI WALLACE, DOUGLAS C · 1985 to 2017
$6.5M
Mouse models for mitochondrial disorders caused by mutations in mtDNAR01OD010944 · OD · UNIVERSITY OF SOUTH ALABAMA · PI ALEXEYEV, MIKHAIL F., WALLACE, DOUGLAS C · 2012 to 2020
$2.6M
High-throughput on-chip platform for interrogation of mitochondrial membrane potential and apoptosisR33CA182384 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI BURKE, PETER J. · 2015 to 2017
$1.2M
NCI NIH HHS R33 CA182384NIH HHS R01 OD010944NINDS NIH HHS R01 NS021328
6 · The paper itself

Abstract

The intrinsic apoptotic pathway and the resultant mitochondrial outer membrane permeabilization (MOMP) via BAK and BAX oligomerization, cytochrome c (cytc) release, and caspase activation are well studied, but their effect on cytosolic pH is poorly understood. Using isolated mitochondria, we show that MOMP results in acidification of the surrounding medium. BAK conformational changes associated with MOMP activate the OMA1 protease to cleave OPA1 resulting in remodeling of the cristae and release of the highly concentrated protons within the cristae invaginations. This was revealed by utilizing a nanomaterial graphene as an optically clear and ultrasensitive pH sensor that can measure ionic changes induced by tethered mitochondria. With this platform, we have found that activation of mitochondrial apoptosis is accompanied by a gradual drop in extra-mitochondrial pH and a decline in membrane potential, both of which can be rescued by adding exogenous cytc. These findings have importance for potential pharmacological manipulation of apoptosis, in the treatment of cancer.

Indexed as

Apoptosisbcl-2 Homologous Antagonist-Killer ProteinBcl-2-Like Protein 11Biosensing TechniquesCarbonyl Cyanide m-Chlorophenyl HydrazoneCell LineCytochromes cGraphiteGTP PhosphohydrolasesHeLa CellsHumansHydrogen-Ion ConcentrationMembrane Potential, MitochondrialMetalloendopeptidasesMitochondrial MembranesMitochondrial Membrane Transport ProteinsBAK1 protein, humanbcl-2 Homologous Antagonist-Killer ProteinBcl-2-Like Protein 11Carbonyl Cyanide m-Chlorophenyl HydrazoneCytochromes cGraphiteGTP PhosphohydrolasesMetalloendopeptidasesMitochondrial Membrane Transport Proteinsmolecule metalloprotease-related protein-1, humanOPA1 protein, humanProto-Oncogene Proteins c-bcl-2RTL10 protein, human

Identifiers

PMID27786282
PMCPMC5081517
OpenAlexW2545039571

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.