Evidence map›Paper›PMID 27784795›Full record

ArticleMolecular cancer therapeutics2016

The Potential Roles of Long Noncoding RNAs (lncRNA) in Glioblastoma Development.

Shuang Liu, Ramkrishna Mitra, Ming-Ming Zhao, Wenhong Fan, Christine M Eischen, Feng Yin, Zhongming Zhao

Open access · greenAbstract read
In one paragraph

Article in Molecular cancer therapeutics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Mechanistic insights into the lncRNA-Notch signaling axis in tumors.Frontiers in cell and developmental biology · 2026
    Review
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  7. Serum lncRNA RAMP2-AS1 Served as a Biomarker of Deep Vein Thrombosis Occurrence and Development in Elderly.Indian journal of hematology & blood transfusion : an official journal of Indian Society of Hematology and Blood Transfusion · 2024
    Article
  8. Long Non-Coding RNAIranian journal of public health · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Shuang Liu *Department of Neurosurgery, Navy General Hospital, PLA. Beijing, 100048, China.
Ramkrishna Mitra *Department of Cancer Biology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA.
Ming-Ming ZhaoDepartment of Neurosurgery, Navy General Hospital, PLA. Beijing, 100048, China.
Wenhong FanDepartment of Recombinant Drugs, National Institutes for Food and Drug Control, Beijing, 100050, China.
Christine M EischenDepartment of Cancer Biology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA.
Feng YinDepartment of Neurosurgery, Navy General Hospital, PLA. Beijing, 100048, China.
Zhongming ZhaoDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN 37203, USA.
PLA Navy General Hospital · CNSidney Kimmel Cancer Center · USNational Institutes for Food and Drug Control · CNThe University of Texas Health Science Center · US

Funding

Novel mechanisms of oncogenic transformation in lung cancerR01CA177786 · NCI · VANDERBILT UNIVERSITY · PI EISCHEN, CHRISTINE M. · 2014 to 2018
$1.6M
Mapping the Genetic Architecture of Complex Disease via RNA-seq and GWAS DataR01LM011177 · NLM · VANDERBILT UNIVERSITY · PI ZHAO, ZHONGMING · 2012 to 2014
$1.0M
MicroRNA and Transcription Factor Co-regulation in CancerR21CA196508 · NCI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ZHAO, ZHONGMING · 2016 to 2017
$368k
Investigating MicroRNAs and Their Regulatory Networks in GlioblastomaR03CA167695 · NCI · VANDERBILT UNIVERSITY · PI ZHAO, ZHONGMING · 2013 to 2014
$154k
NCI NIH HHS R01 CA177786NCI NIH HHS R03 CA167695NCI NIH HHS R21 CA196508NLM NIH HHS R01 LM011177
6 · The paper itself

Abstract

Long noncoding RNA (lncRNA) may contribute to the initiation and progression of tumor. In this study, we first systematically compared lncRNA and mRNA expression between glioblastoma and paired normal brain tissues using microarray data. We found 27 lncRNA and 82 mRNA significantly upregulated in glioblastoma, as well as 198 lncRNA and 285 mRNA significantly downregulated in glioblastoma. We identified 138 coexpressed lncRNA-mRNA pairs from these differentially expressed lncRNA and genes. Subsequent pathway analysis of the lncRNA-paired genes indicated that EphrinB-EPHB, p75-mediated signaling, TNFα/NF-κB, and ErbB2/ErbB3 signaling pathways might be altered in glioblastoma. Specifically, lncRNA RAMP2-AS1 had significant decrease of expression in glioblastoma tissues and showed coexpressional relationship with NOTCH3, an important tumor promoter in many neoplastic diseases. Our follow up experiment indicated that (i) an overexpression of RAMP2-AS1 reduced glioblastoma cell proliferation in vitro and also reduced glioblastoma xenograft tumors in vivo; (ii) NOTCH3 and RAMP2-AS1 coexpression rescued the inhibitory action of RAMP2-AS1 in glioblastoma cells; and (iii) RNA pull-down assay revealed a direct interaction of RAMP2-AS1 with DHC10, which may consequently inhibit, as we hypothesize, the expression of NOTCH3 and its downstream signaling molecule HES1 in glioblastoma. Taken together, our data revealed that lncRNA expression profile in glioblastoma tissue was significantly altered; and RAMP2-AS1 might play a tumor suppressive role in glioblastoma through an indirect inhibition of NOTCH3 Our results provided some insights into understanding the key roles of lncRNA-mRNA coregulation in human glioblastoma and the mechanisms responsible for glioblastoma progression and pathogenesis. Mol Cancer Ther; 15(12); 2977-86. ©2016 AACR.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsBrain NeoplasmsCell CycleCell Line, TumorCell ProliferationCell Transformation, NeoplasticComputational BiologyDisease Models, AnimalGene Expression ProfilingGene OntologyGlioblastomaHumansMiceReceptor, Notch3RNA, Long NoncodingReceptor, Notch3RNA, Long NoncodingRNA, Messenger

Identifiers

PMID27784795
PMCPMC5136321
OpenAlexW2545692517

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.