Evidence map›Paper›PMID 27783199›Full record

ArticleJournal of computer-aided molecular design2016

Compilation and physicochemical classification analysis of a diverse hERG inhibition database.

Remigijus Didziapetris, Kiril Lanevskij

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of computer-aided molecular design, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Deep Learning-Based Prediction of Drug-Induced Cardiotoxicity.Journal of chemical information and modeling · 2019
    Article
  11. Ligand biological activity predicted by cleaning positive and negative chemical correlations.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Remigijus DidziapetrisVšĮ "Aukštieji algoritmai", A.Mickevičiaus 29, 08117, Vilnius, Lithuania.
Kiril LanevskijVšĮ "Aukštieji algoritmai", A.Mickevičiaus 29, 08117, Vilnius, Lithuania. kiril.lanevskij@acdlabs.com.ORCID 0000-0001-7419-8169

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A large and chemically diverse hERG inhibition data set comprised of 6690 compounds was constructed on the basis of ChEMBL bioactivity database and original publications dealing with experimental determination of hERG activities using patch-clamp and competitive displacement assays. The collected data were converted to binary format at 10 µM activity threshold and subjected to gradient boosting machine classification analysis using a minimal set of physicochemical and topological descriptors. The tested parameters involved lipophilicity (log P), ionization (pK

Indexed as

Databases, ChemicalAnimalsChemistry, PhysicalCHO CellsComputer SimulationCricetulusERG1 Potassium ChannelHEK293 CellsHumansHydrogen-Ion ConcentrationModels, ChemicalMolecular StructurePotassium Channel BlockersQuantitative Structure-Activity RelationshipSoftwareERG1 Potassium ChannelPotassium Channel BlockersClassificationhERGlog PpK aQSAR

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.