Evidence map›Paper›PMID 27782724›Full record

ArticleMedical physics2016

Computer aided diagnosis of prostate cancer: A texton based approach.

Andrik Rampun, Bernie Tiddeman, Reyer Zwiggelaar, Paul Malcolm

Abstract read
In one paragraph

Article in Medical physics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Andrik RampunDepartment of Computer Science, Aberystwyth University, Aberystwyth, Ceredigion SY23 3DB, United Kingdom.
Bernie TiddemanDepartment of Computer Science, Aberystwyth University, Aberystwyth, Ceredigion SY23 3DB, United Kingdom.
Reyer ZwiggelaarDepartment of Computer Science, Aberystwyth University, Aberystwyth, Ceredigion SY23 3DB, United Kingdom.
Paul MalcolmDepartment of Radiology, Norfolk & Norwich University Hospital, Norwich NR4 7UY, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeIn this paper the authors propose a texton based prostate computer aided diagnosis approach which bypasses the typical feature extraction process such as filtering and convolution which can be computationally expensive. The study focuses the peripheral zone because 75% of prostate cancers start within this region and the majority of prostate cancers arising within this region are more aggressive than those arising in the transitional zone.

methodsFor the model development, square patches were extracted at random locations from malignant and benign regions. Subsequently, extracted patches were aggregated and clustered using k-means clustering to generate textons that represent both regions. All textons together form a texton dictionary, which was used to construct a texton map for every peripheral zone in the training images. Based on the texton map, histogram models for each malignant and benign tissue samples were constructed and used as a feature vector to train our classifiers. In the testing phase, four machine learning algorithms were employed to classify each unknown sample tissue based on its corresponding feature vector.

resultsThe proposed method was tested on 418 T2-W MR images taken from 45 patients. Evaluation results show that the best three classifiers were Bayesian network (A

conclusionsThe authors have developed a prostate computer aided diagnosis method based on textons using a single modality of T2-W MRI without the need for the typical feature extraction methods, such as filtering and convolution. The proposed method could form a solid basis for a multimodality magnetic resonance imaging based systems.

Indexed as

AgedAlgorithmsBayes TheoremDiagnosis, Computer-AssistedHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingMaleMiddle AgedProstatic Neoplasms

Identifiers

PMID27782724
PMCPMC5035312

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.