Evidence map›Paper›PMID 27779617›Full record

ArticleThe ISME journal2017

Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters.

Adriana Lopes Dos Santos, Priscillia Gourvil, Margot Tragin, Mary-Hélène Noël, Johan Decelle, Sarah Romac, Daniel Vaulot

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
9.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. The genome sequence ofWellcome open research · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Tara Oceans: towards global ocean ecosystems biology.Nature reviews. Microbiology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Adriana Lopes Dos SantosSorbonne Universités, UPMC Université Paris 06, CNRS, UMR 7144 Station Biologique de Roscoff, Roscoff, France.
Priscillia GourvilSorbonne Universités, UPMC Université Paris 06, CNRS, UMR 7144 Station Biologique de Roscoff, Roscoff, France.
Margot TraginSorbonne Universités, UPMC Université Paris 06, CNRS, UMR 7144 Station Biologique de Roscoff, Roscoff, France.
Mary-Hélène NoëlNational Institute for Environmental Studies, Tsukuba, Japan.
Johan DecelleSorbonne Universités, UPMC Université Paris 06, CNRS, UMR 7144 Station Biologique de Roscoff, Roscoff, France.
Sarah RomacSorbonne Universités, UPMC Université Paris 06, CNRS, UMR 7144 Station Biologique de Roscoff, Roscoff, France.
Daniel VaulotSorbonne Universités, UPMC Université Paris 06, CNRS, UMR 7144 Station Biologique de Roscoff, Roscoff, France.ORCID 0000-0002-0717-5685
Centre National de la Recherche Scientifique · FRNational Institute for Environmental Studies · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prasinophytes clade VII is a group of pico/nano-planktonic green algae (division Chlorophyta) for which numerous ribosomal RNA (rRNA) sequences have been retrieved from the marine environment in the last 15 years. A large number of strains have also been isolated but have not yet received a formal taxonomic description. A phylogenetic analysis of available strains using both the nuclear 18S and plastidial 16S rRNA genes demonstrates that this group composes at least 10 different clades: A1-A7 and B1-B3. Analysis of sequences from the variable V9 region of the 18S rRNA gene collected during the Tara Oceans expedition and in the frame of the Ocean Sampling Day consortium reveal that clade VII is the dominant Chlorophyta group in oceanic waters, replacing Mamiellophyceae, which have this role in coastal waters. At some location, prasinophytes clade VII can even be the dominant photosynthetic eukaryote representing up to 80% of photosynthetic metabarcodes overall. B1 and A4 are the overall dominant clades and different clades seem to occupy distinct niches, for example, A6 is dominant in surface Mediterranean Sea waters, whereas A4 extend to high temperate latitudes. Our work demonstrates that prasinophytes clade VII constitute a highly diversified group, which is a key component of phytoplankton in open oceanic waters but has been neglected in the conceptualization of marine microbial diversity and carbon cycle.

Indexed as

Genetic VariationChlorophytaDNA, RibosomalEukaryotaMediterranean SeaOceans and SeasPhotosynthesisPhylogenyPhytoplanktonSeawaterDNA, Ribosomal

Identifiers

PMID27779617
PMCPMC5270561
OpenAlexW2535082796

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.