Evidence map›Paper›PMID 27777636›Full record

ArticleClinical epigenetics2016

Maternal vitamin D depletion alters DNA methylation at imprinted loci in multiple generations.

Jing Xue, Sarah A Schoenrock, William Valdar, Lisa M Tarantino, Folami Y Ideraabdullah

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
11.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 94 citations in OpenAlex.

  1. Trial
  2. Effects of Maternal Vitamin D Supplementation on the Maternal and Infant Epigenome.Breastfeeding medicine : the official journal of the Academy of Breastfeeding Medicine · 2018
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  20. Harnessing male germline epigenomics for the genetic improvement in cattle.Journal of animal science and biotechnology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jing XueNutrition Research Institute, University of North Carolina, Kannapolis, NC 28081 USA.
Sarah A SchoenrockDepartment of Genetics, School of Medicine, University of North Carolina, Chapel Hill, NC 27599 USA ; Neurobiology Curriculum, University of North Carolina, Chapel Hill, NC 27599 USA.
William ValdarDepartment of Genetics, School of Medicine, University of North Carolina, Chapel Hill, NC 27599 USA ; Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599 USA.
Lisa M TarantinoDepartment of Genetics, School of Medicine, University of North Carolina, Chapel Hill, NC 27599 USA ; Division of Pharmacotherapy and Experimental Therapeutics, Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC 27599 USA.
Folami Y IderaabdullahNutrition Research Institute, University of North Carolina, Kannapolis, NC 28081 USA ; Department of Genetics, School of Medicine, University of North Carolina, Chapel Hill, NC 27599 USA ; Department of Nutrition, Gillings School of Public Health, University of North Carolina, Chapel Hill, NC 27599 USA.
University of North Carolina at Chapel Hill · USDavid H. Murdock Research Institute · US

Funding

UNIV OF NORTH CAROLINA CLINICAL NUTRITION RESEARCH UNITP30DK056350 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SUSAN M. SMITH · 1999 to 2026
$31.6M
Role of maternal diet and allelic imbalance in behavior.R01MH100241 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TARANTINO, LISA M, VALDAR, WILLIAM · 2013 to 2017
$2.8M
A genetic approach to understanding mechanisms of epigenetic perturbation by environmentK22ES023849 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI IDERAABDULLAH, FOLAMI · 2015 to 2017
$471k
NIDDK NIH HHS P30 DK056350NIEHS NIH HHS K22 ES023849NIMH NIH HHS R01 MH100241
6 · The paper itself

Abstract

backgroundEnvironmental perturbation of epigenetic mechanisms is linked to a growing number of diseases. Characterizing the role environmental factors play in modifying the epigenome is important for disease etiology. Vitamin D is an essential nutrient affecting brain, bone, heart, immune and reproductive health. Vitamin D insufficiency is a global issue, and the role in maternal and child health remains under investigation.

methodsWe used Collaborative Cross (CC) inbred mice to characterize the effect of maternal vitamin D depletion on offspring phenotypic and epigenetic outcomes at imprinted domains (

resultsMaternal vitamin D deficiency led to altered body weight and DNA methylation in two generations of offspring. Loci assayed in adult liver and sperm were mostly hypomethylated, but changes were few and small in effect size (<7 % difference on average). There was no change in total expression of genes adjacent to methylation changes in neonatal liver. Methylation changes were cell type specific such that changes at

conclusionsThese findings demonstrate that maternal vitamin D status plays a role in determining DNA methylation state in the germline and soma. Detection of methylation changes in the unexposed second-generation demonstrates that maternal vitamin D depletion can have long-term effects on the epigenome of subsequent generations. Differences in vitamin D-dependent epigenetic state between cell types and generations indicate perturbation of the epigenetic landscape rather than a targeted, locus-specific effect. While the biological importance of these subtle changes remains unclear, they warrant an investigation of epigenome-wide effects of maternal vitamin D depletion.

Indexed as

DNA MethylationGenomic ImprintingAnimalsBody WeightDisease Models, AnimalEpigenesis, GeneticFemaleHumansLiverMaleMiceMothersPregnancyPrenatal Exposure Delayed EffectsSpermatozoaVitamin D DeficiencyCollaborative CrossEpigenetic inheritanceImprintingMaternal dietParent of originVitamin D

Identifiers

PMID27777636
PMCPMC5062906
OpenAlexW2531789371

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.