Evidence map›Paper›PMID 27777503›Full record

ArticleMolecular vision2016

North Carolina macular dystrophy (MCDR1) caused by a novel tandem duplication of the

Sara J Bowne, Lori S Sullivan, Dianna K Wheaton, Kirsten G Locke, Kaylie D Jones, Daniel C Koboldt, Robert S Fulton, Richard K Wilson, Susan H Blanton, David G Birch and 1 more

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. North Carolina Macular Dystrophy.Advances in experimental medicine and biology · 2025
    Review
  3. A novelMolecular vision · 2024
    Article
  4. Pseudocoloboma-like maculopathy with biallelicJournal of medical genetics · 2023
    Article
  5. Review
  6. Review
  7. Article
  8. A novel tandem duplication of PRDM13 in a Chinese family with North Carolina macular dystrophy.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2022
    Article
  9. Article
  10. A novel duplication involvingMolecular vision · 2021
    Article
  11. Review
  12. A uniqueMolecular vision · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Observational
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Sara J BowneHuman Genetics Center, School of Public Health, The University of Texas Health Science Center (UTHealth), Houston, TX.
Lori S SullivanHuman Genetics Center, School of Public Health, The University of Texas Health Science Center (UTHealth), Houston, TX.
Dianna K WheatonRetina Foundation of the Southwest, Dallas, TX.
Kirsten G LockeRetina Foundation of the Southwest, Dallas, TX.
Kaylie D JonesRetina Foundation of the Southwest, Dallas, TX.
Daniel C KoboldtMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO.
Robert S FultonMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO.
Richard K WilsonMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO.
Susan H BlantonDr. John T. Macdonald Foundation Department of Human Genetics, Hussman Institute for Human Genomics, University of Miami, Miami, FL.
David G BirchRetina Foundation of the Southwest, Dallas, TX; Dept. of Ophthalmology, University of Texas Southwestern Medical Center, Dallas, TX.
Stephen P DaigerHuman Genetics Center, School of Public Health, The University of Texas Health Science Center (UTHealth), Houston, TX; Ruiz Dept. of Ophthalmology, University of Texas Health Science Center Houston (UTHealth), Houston, TX.
James S. McDonnell Foundation · USRetina Foundation of the Southwest · US

Funding

MEASURES OF HUMAN RECEPTOR AND POST RECEPTOR ACTIVITYR01EY009076 · NEI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI BIRCH, DAVID G, HOOD, DONALD C. · 1991 to 2021
$8.3M
DNA LINKAGE STUDIES OF DEGENERATIVE RETINAL DISEASESR01EY007142 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI DAIGER, STEPHEN P · 1989 to 2017
$4.1M
NEI NIH HHS R01 EY007142NEI NIH HHS R01 EY009076
6 · The paper itself

Abstract

purposeTo identify the underlying cause of disease in a large family with North Carolina macular dystrophy (NCMD).

methodsA large four-generation family (RFS355) with an autosomal dominant form of NCMD was ascertained. Family members underwent comprehensive visual function evaluations. Blood or saliva from six affected family members and three unaffected spouses was collected and DNA tested for linkage to the MCDR1 locus on chromosome 6q12. Three affected family members and two unaffected spouses underwent whole exome sequencing (WES) and subsequently, custom capture of the linkage region followed by next-generation sequencing (NGS). Standard PCR and dideoxy sequencing were used to further characterize the mutation.

resultsOf the 12 eyes examined in six affected individuals, all but two had Gass grade 3 macular degeneration features. Large central excavation of the retinal and choroid layers, referred to as a macular caldera, was seen in an age-independent manner in the grade 3 eyes. The calderas are unique to affected individuals with MCDR1. Genome-wide linkage mapping and haplotype analysis of markers from the chromosome 6q region were consistent with linkage to the MCDR1 locus. Whole exome sequencing and custom-capture NGS failed to reveal any rare coding variants segregating with the phenotype. Analysis of the custom-capture NGS sequencing data for copy number variants uncovered a tandem duplication of approximately 60 kb on chromosome 6q. This region contains two genes,

conclusionsThe cause of disease in the original family with MCDR1 and several others has been recently reported to be dysregulation of the

Indexed as

MutationAdultAgedChildChild, PreschoolChromosome MappingCorneal Dystrophies, HereditaryEye ProteinsFemaleGenetic LinkageHistone-Lysine N-MethyltransferaseHumansMalePedigreePolymerase Chain ReactionPolymorphism, Single NucleotideEye ProteinsHistone-Lysine N-MethyltransferaseTranscription Factors

Identifiers

PMID27777503
PMCPMC5070570
OpenAlexW2540345998

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.