Evidence map›Paper›PMID 27776107›Full record

ArticleNature immunology2016

RASGRP1 deficiency causes immunodeficiency with impaired cytoskeletal dynamics.

Elisabeth Salzer, Deniz Cagdas, Miroslav Hons, Emily M Mace, Wojciech Garncarz, Özlem Yüce Petronczki, René Platzer, Laurène Pfajfer, Ivan Bilic, Sol A Ban and 20 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in Nature immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 1 pooled it
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 1 synthesis or guideline pooled it, 135 citations in OpenAlex.

  1. Mechanistic Characterization ofFrontiers in immunology · 2019
    Pooled it
  2. Article
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  10. Acta biochimica et biophysica Sinica · 2024
    Article
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  16. When to suspect inborn errors of immunity in Epstein-Barr virus-related lymphoproliferative disorders.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2023
    Review
  17. [Development of autoimmunity in patients with primary immunodeficiencies].Revista medica del Instituto Mexicano del Seguro Social · 2023
    Article
  18. Review
  19. Article
  20. Novel PGM3 mutation in two siblings with combined immunodeficiency and childhood bullous pemphigoid: a case report and review of the literature.Allergy, asthma, and clinical immunology : official journal of the Canadian Society of Allergy and Clinical Immunology · 2022
    Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

30 authors at 6 institutions in 5 countries.

Elisabeth SalzerCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Deniz CagdasSection of Pediatric Immunology, Hacettepe University, Ihsan Dogramaci Children's Hospital, Ankara, Turkey.
Miroslav HonsInstitute of Science and Technology Austria, Klosterneuburg, Austria.
Emily M MaceCenter for Human Immunobiology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas, USA.
Wojciech GarncarzCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Özlem Yüce PetronczkiCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
René PlatzerInstitute for Hygiene and Applied Immunology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna, Austria.
Laurène PfajferCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Ivan BilicCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Sol A BanCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Katharina L WillmannCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Malini MukherjeeCenter for Human Immunobiology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas, USA.
Verena SupperInstitute for Hygiene and Applied Immunology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna, Austria.
Hsiang Ting HsuCenter for Human Immunobiology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas, USA.
Pinaki P BanerjeeCenter for Human Immunobiology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas, USA.
Papiya SinhaCenter for Human Immunobiology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas, USA.
Fabienne McClanahanCentre for Haemato-Oncology, Barts Cancer Institute - a CR-UK Centre of Excellence, Queen Mary University of London, London, UK.
Gerhard J ZlabingerInstitute of Immunology, Center of Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna, Austria.
Winfried F PicklChristian Doppler Laboratory for Immunomodulation and Institute of Immunology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna, Austria.
John G GribbenCentre for Haemato-Oncology, Barts Cancer Institute - a CR-UK Centre of Excellence, Queen Mary University of London, London, UK.
Hannes StockingerInstitute for Hygiene and Applied Immunology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0001-6404-4430
Keiryn L BennettCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Johannes B HuppaInstitute for Hygiene and Applied Immunology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna, Austria.
Loïc DupréCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Özden SanalSection of Pediatric Immunology, Hacettepe University, Ihsan Dogramaci Children's Hospital, Ankara, Turkey.
Ulrich JägerDepartment of Medicine I, Division of Hematology and Hemostaseology, Medical University of Vienna, Vienna, Austria.
Michael SixtInstitute of Science and Technology Austria, Klosterneuburg, Austria.
Ilhan TezcanSection of Pediatric Immunology, Hacettepe University, Ihsan Dogramaci Children's Hospital, Ankara, Turkey.
Jordan S OrangeCenter for Human Immunobiology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas, USA.
Kaan BoztugCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Austrian Academy of Sciences · ATMedical University of Vienna · ATBaylor College of Medicine · USHacettepe University Hospital · TRInstitute of Science and Technology Austria · ATQueen Mary University of London · GB

Funding

Tissue CoreP01CA081534 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KIPPS, THOMAS J · 2000 to 2016
$59.5M
GENETIC, IMMUNOLOGIC AND MECHANISTIC BASIS OF HUMAN NK CELL DEFICIENCYR01AI120989 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ORANGE, JORDAN SCOTT · 2016 to 2025
$7.7M
Directing Function at the Natural Killer Cell Secretory Immunological SynapseR01AI067946 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ORANGE, JORDAN SCOTT · 2007 to 2019
$4.8M
Directing Function at the Natural Killer Cell Secretory Immunological SynapseR37AI067946 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Jordan Scott Orange · 2024 to 2026
$1.5M
Austrian Science Fund FWF M 1809European Research Council 310857NCI NIH HHS P01 CA081534NIAID NIH HHS R01 AI067946NIAID NIH HHS R01 AI120989NIAID NIH HHS R37 AI067946
6 · The paper itself

Abstract

RASGRP1 is an important guanine nucleotide exchange factor and activator of the RAS-MAPK pathway following T cell antigen receptor (TCR) signaling. The consequences of RASGRP1 mutations in humans are unknown. In a patient with recurrent bacterial and viral infections, born to healthy consanguineous parents, we used homozygosity mapping and exome sequencing to identify a biallelic stop-gain variant in RASGRP1. This variant segregated perfectly with the disease and has not been reported in genetic databases. RASGRP1 deficiency was associated in T cells and B cells with decreased phosphorylation of the extracellular-signal-regulated serine kinase ERK, which was restored following expression of wild-type RASGRP1. RASGRP1 deficiency also resulted in defective proliferation, activation and motility of T cells and B cells. RASGRP1-deficient natural killer (NK) cells exhibited impaired cytotoxicity with defective granule convergence and actin accumulation. Interaction proteomics identified the dynein light chain DYNLL1 as interacting with RASGRP1, which links RASGRP1 to cytoskeletal dynamics. RASGRP1-deficient cells showed decreased activation of the GTPase RhoA. Treatment with lenalidomide increased RhoA activity and reversed the migration and activation defects of RASGRP1-deficient lymphocytes.

Indexed as

ActinsAdolescentAngiogenesis InhibitorsB-LymphocytesCell MovementCell ProliferationChildCytoskeletonCytotoxicity, ImmunologicDNA-Binding ProteinsDNA Mutational AnalysisDyneinsFemaleGuanine Nucleotide Exchange FactorsHEK293 CellsHumansActinsAngiogenesis InhibitorsDNA-Binding ProteinsDyneinsGuanine Nucleotide Exchange FactorsLenalidomideRASGRP1 protein, humanRNA, Small InterferingThalidomide

Identifiers

PMID27776107
PMCPMC6400263
OpenAlexW2534647638

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.