Evidence map›Paper›PMID 27775080›Full record

ArticleScientific reports2016

Substitution rate and natural selection in parvovirus B19.

Gorana G Stamenković, Valentina S Ćirković, Marina M Šiljić, Jelena V Blagojević, Aleksandra M Knežević, Ivana D Joksić, Maja P Stanojević

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Gorana G StamenkovićDepartment of Genetic Research, Institute for biological research "Siniša Stanković", University of Belgrade, 142 Despot Stephan Blvd, 11060 Belgrade, R Serbia.
Valentina S ĆirkovićInstitute for Microbiology and Immunology, School of Medicine, University of Belgrade, 1/1 Dr Subotića St, 11000 Belgrade, R Serbia.
Marina M ŠiljićInstitute for Microbiology and Immunology, School of Medicine, University of Belgrade, 1/1 Dr Subotića St, 11000 Belgrade, R Serbia.
Jelena V BlagojevićDepartment of Genetic Research, Institute for biological research "Siniša Stanković", University of Belgrade, 142 Despot Stephan Blvd, 11060 Belgrade, R Serbia.
Aleksandra M KneževićInstitute for Microbiology and Immunology, School of Medicine, University of Belgrade, 1/1 Dr Subotića St, 11000 Belgrade, R Serbia.
Ivana D JoksićClinic of Obstetrics and Gynecology "Narodni front", 62 Kraljice Natalije St, 11000 Belgrade, R Serbia.
Maja P StanojevićInstitute for Microbiology and Immunology, School of Medicine, University of Belgrade, 1/1 Dr Subotića St, 11000 Belgrade, R Serbia.
University of Belgrade · RS

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to estimate substitution rate and imprints of natural selection on parvovirus B19 genotype 1. Studied datasets included 137 near complete coding B19 genomes (positions 665 to 4851) for phylogenetic and substitution rate analysis and 146 and 214 partial genomes for selection analyses in open reading frames ORF1 and ORF2, respectively, collected 1973-2012 and including 9 newly sequenced isolates from Serbia. Phylogenetic clustering assigned majority of studied isolates to G1A. Nucleotide substitution rate for total coding DNA was 1.03 (0.6-1.27) x 10

Indexed as

CapsidCapsid ProteinsCodonDNA, ViralEpitopesGenetic VariationGenome, ViralGenotypeHumansImmunoglobulin GImmunoglobulin MNucleotidesOpen Reading FramesParvoviridae InfectionsParvovirus B19, HumanPhylogenyCapsid ProteinsCodonDNA, ViralEpitopesImmunoglobulin GImmunoglobulin MNucleotides

Identifiers

PMID27775080
PMCPMC5075947
OpenAlexW2537576740

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.