Evidence map›Paper›PMID 27770190›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2017

A FAS-ligand variant associated with autoimmune lymphoproliferative syndrome in cats.

Danielle Aberdein, John S Munday, Barbara Gandolfi, Keren E Dittmer, Richard Malik, Dorian J Garrick, Leslie A Lyons, 99 Lives Consortium

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

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  10. A Deletion inGenes · 2020
    Article
  11. Precision medicine validation: identifying theJournal of feline medicine and surgery · 2019
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Danielle AberdeinPathobiology, Institute of Veterinary, Animal, and Biomedical Sciences, Massey University, Tennent Drive, Palmerston North, New Zealand.ORCID 0000-0002-4769-5247
John S MundayPathobiology, Institute of Veterinary, Animal, and Biomedical Sciences, Massey University, Tennent Drive, Palmerston North, New Zealand. j.munday@massey.ac.nz.
Barbara GandolfiDepartment of Veterinary Medicine and Surgery, College of Veterinary Medicine, University of Missouri - Columbia, Columbia, MO, 65211, USA.
Keren E DittmerPathobiology, Institute of Veterinary, Animal, and Biomedical Sciences, Massey University, Tennent Drive, Palmerston North, New Zealand.
Richard MalikCentre for Veterinary Education, University of Sydney, Sydney, NSW, 2006, Australia.
Dorian J GarrickPathobiology, Institute of Veterinary, Animal, and Biomedical Sciences, Massey University, Tennent Drive, Palmerston North, New Zealand.
Leslie A LyonsDepartment of Veterinary Medicine and Surgery, College of Veterinary Medicine, University of Missouri - Columbia, Columbia, MO, 65211, USA.
99 Lives Consortium
Massey University · NZMissouri College · USIowa State University · USThe University of Sydney · AU

Funding

Genetic Mapping Resources for Common Mammalian DiseasesR24RR016094 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI LYONS, LESLIE A · 2002 to 2011
$3.0M
Genetic Mapping Resources for Common Mammalian DiseasesR24OD010928 · OD · UNIVERSITY OF MISSOURI-COLUMBIA · PI LYONS, LESLIE A · 2012 to 2015
$911k
NCRR NIH HHS R24 RR016094NIH HHS R24 OD010928
6 · The paper itself

Abstract

British shorthair (BSH) kittens in multiple litters died as a result of a severe non-neoplastic lymphoproliferative disease that showed many similarities with human autoimmune lymphoproliferative syndrome (ALPS). Human ALPS is caused by inherited defects in FAS-mediated lymphocyte apoptosis and the possibility of similar defects was investigated in BSH cats. The whole genomes of two affected kittens were sequenced and compared to 82 existing cat genomes. Both BSH kittens had homozygous insertions of an adenine within exon 3 of the FAS-ligand gene. The resultant frameshift and premature stop codon were predicted to result in a severely truncated protein that is unlikely to be able to activate FAS. Three additional affected BSH kittens were homozygous for the variant, while 11 of 16 unaffected, but closely related, BSH cats were heterozygous for the variant. All BSH cats in the study were from a population with significant inbreeding. The variant was not identified in a further survey of 510 non-BSH cats. Identification of a genetic defect in the FAS-mediated apoptosis pathway confirms that the lymphoproliferative disease in BSH cats fulfills the diagnostic criteria for ALPS in humans. These results will enable the development of a genetic test to detect BSH carrier animals.

Indexed as

AnimalsApoptosisAutoimmune Lymphoproliferative SyndromeCatsCodon, NonsenseFas Ligand Proteinfas ReceptorFrameshift MutationGenomeHumansLymphocytesMutationWhole Genome SequencingCodon, NonsenseFas Ligand Proteinfas Receptor

Identifiers

PMID27770190
OpenAlexW2535245759

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.