Evidence map›Paper›PMID 27768682›Full record

ArticlePLoS biology2016

Selection Transforms the Landscape of Genetic Variation Interacting with Hsp90.

Kerry A Geiler-Samerotte, Yuan O Zhu, Benjamin E Goulet, David W Hall, Mark L Siegal

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 106 citations in OpenAlex.

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  20. Constructive Neutral Evolution 20 Years Later.Journal of molecular evolution · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Kerry A Geiler-SamerotteCenter for Genomics and Systems Biology, Department of Biology, New York University, New York, New York, United States of America.
Yuan O ZhuDepartment of Biology, Stanford University, Stanford, California, United States of America.
Benjamin E GouletCenter for Genomics and Systems Biology, Department of Biology, New York University, New York, New York, United States of America.
David W HallDepartment of Genetics, University of Georgia, Athens, Georgia, United States of America.
Mark L SiegalCenter for Genomics and Systems Biology, Department of Biology, New York University, New York, New York, United States of America.
New York University · USStanford University · USUniversity of Georgia · US

Funding

Genomics of rapid adaptation in the lab and in the wildR35GM118165 · NIGMS · STANFORD UNIVERSITY · PI Dmitri Petrov · 2016 to 2026
$8.3M
Sequencing yeast lines to measure rates of neutral and deleterious mutationsR01GM097415 · NIGMS · NEW YORK UNIVERSITY · PI PETROV, DMITRI, SIEGAL, MARK L · 2011 to 2014
$2.3M
Genetic and Nongenetic Variation in Complex TraitsR35GM118170 · NIGMS · NEW YORK UNIVERSITY · PI SIEGAL, MARK L · 2016 to 2021
$1.7M
Sources and consequences of phenotypic variation in complex regulatory networksR01GM086673 · NIGMS · NEW YORK UNIVERSITY · PI SIEGAL, MARK L · 2010 to 2013
$929k
Reducing genetic buffering to identify QTLs that affect cell shape and growthF32GM103166 · NIGMS · NEW YORK UNIVERSITY · PI GEILER-SAMEROTTE, KERRY A · 2012 to 2013
$101k
NIGMS NIH HHS F32 GM103166NIGMS NIH HHS R01 GM086673NIGMS NIH HHS R01 GM097415NIGMS NIH HHS R35 GM118165NIGMS NIH HHS R35 GM118170
6 · The paper itself

Abstract

The protein-folding chaperone Hsp90 has been proposed to buffer the phenotypic effects of mutations. The potential for Hsp90 and other putative buffers to increase robustness to mutation has had major impact on disease models, quantitative genetics, and evolutionary theory. But Hsp90 sometimes contradicts expectations for a buffer by potentiating rapid phenotypic changes that would otherwise not occur. Here, we quantify Hsp90's ability to buffer or potentiate (i.e., diminish or enhance) the effects of genetic variation on single-cell morphological features in budding yeast. We corroborate reports that Hsp90 tends to buffer the effects of standing genetic variation in natural populations. However, we demonstrate that Hsp90 tends to have the opposite effect on genetic variation that has experienced reduced selection pressure. Specifically, Hsp90 tends to enhance, rather than diminish, the effects of spontaneous mutations and recombinations. This result implies that Hsp90 does not make phenotypes more robust to the effects of genetic perturbation. Instead, natural selection preferentially allows buffered alleles to persist and thereby creates the false impression that Hsp90 confers greater robustness.

Indexed as

Genetic VariationSelection, GeneticEpistasis, GeneticHSP90 Heat-Shock ProteinsMutationRecombination, GeneticSaccharomyces cerevisiaeHSP90 Heat-Shock Proteins

Identifiers

PMID27768682
PMCPMC5074785
OpenAlexW2538183526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.