Evidence map›Paper›PMID 27767179›Full record

ArticleScientific reports2016

The serologically defined colon cancer antigen-3 (SDCCAG3) is involved in the regulation of ciliogenesis.

Fangyan Yu, Shruti Sharma, Agnieszka Skowronek, Kai Sven Erdmann

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Fangyan YuDepartment of Biomedical Science &Centre of Membrane Interactions and Dynamics, University of Sheffield, S10 2TN Sheffield, UK.
Shruti SharmaDepartment of Biomedical Science &Centre of Membrane Interactions and Dynamics, University of Sheffield, S10 2TN Sheffield, UK.
Agnieszka SkowronekDepartment of Biomedical Science &Centre of Membrane Interactions and Dynamics, University of Sheffield, S10 2TN Sheffield, UK.
Kai Sven ErdmannDepartment of Biomedical Science &Centre of Membrane Interactions and Dynamics, University of Sheffield, S10 2TN Sheffield, UK.
University of Sheffield · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A primary cilium is present on most eukaryotic cells and represents a specialized organelle dedicated to signal transduction and mechanosensing. Defects in cilia function are the cause for several human diseases called ciliopathies. The serologically defined colon cancer antigen-3 (SDCCAG3) is a recently described novel endosomal protein mainly localized at early and recycling endosomes and interacting with several components of membrane trafficking pathways. Here we describe localization of SDCCAG3 to the basal body of primary cilia. Furthermore, we demonstrate that decreased expression levels of SDCCAG3 correlate with decreased ciliary length and a reduced percentage of ciliated cells. We show that SDCCAG3 interacts with the intraflagellar transport protein 88 (IFT88), a crucial component of ciliogenesis and intraciliary transport. Mapping experiments revealed that the N-terminus of SDCCAG3 mediates this interaction by binding to a region within IFT88 comprising several tetratricopeptide (TRP) repeats. Finally, we demonstrate that SDCCAG3 is important for ciliary localization of the membrane protein Polycystin-2, a protein playing an important role in the formation of polycystic kidney disease, but not for Rab8 another ciliary protein. Together these data suggest a novel role for SDCCAG3 in ciliogenesis and in localization of cargo to primary cilia.

Indexed as

AnimalsAntigens, NeoplasmBinding SitesCiliaEndosomesGene Expression Regulation, NeoplasticGreen Fluorescent ProteinsHEK293 CellsHeLa CellsHumansIntracellular Signaling Peptides and ProteinsKidney Tubules, CollectingMiceMicroscopy, ConfocalProtein DomainsProtein TransportAntigens, NeoplasmENTR1 protein, humanGreen Fluorescent ProteinsIFT88 protein, humanIntracellular Signaling Peptides and ProteinsRNA, Small InterferingTRPP Cation ChannelsTumor Suppressor ProteinsVesicular Transport Proteins

Identifiers

PMID27767179
PMCPMC5073310
OpenAlexW2534963189

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.