Evidence map›Paper›PMID 27764134›Full record

ArticlePloS one2016

Calcium Sensitive Fluorescent Dyes Fluo-4 and Fura Red under Pressure: Behaviour of Fluorescence and Buffer Properties under Hydrostatic Pressures up to 200 MPa.

D Schneidereit, H Vass, B Reischl, R J Allen, O Friedrich

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

D SchneidereitInstitute of Medical Biotechnology, Friedrich-Alexander-University Erlangen-Nuernberg, 91052 Erlangen, Bavaria, Germany.ORCID http://orcid.org/0000-0001-7351-6428
H VassSchool of Physics and Astronomy, University of Edinburgh, Edinburgh EH9 3FD, Scotland, United Kingdom.
B ReischlInstitute of Medical Biotechnology, Friedrich-Alexander-University Erlangen-Nuernberg, 91052 Erlangen, Bavaria, Germany.
R J AllenSchool of Physics and Astronomy, University of Edinburgh, Edinburgh EH9 3FD, Scotland, United Kingdom.
O FriedrichInstitute of Medical Biotechnology, Friedrich-Alexander-University Erlangen-Nuernberg, 91052 Erlangen, Bavaria, Germany.
Friedrich-Alexander-Universität Erlangen-Nürnberg · DEUniversity of Edinburgh · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fluorescent Ca2+ sensitive dyes Fura Red (ratiometric) and Fluo-4 (non-ratiometric) are widely utilized for the optical assessment of Ca2+ fluctuations in vitro as well as in situ. The fluorescent behavior of these dyes is strongly depends on temperature, pH, ionic strength and pressure. It is crucial to understand the response of these dyes to pressure when applying calcium imaging technologies in the field of high pressure bioscience. Therefore, we use an optically accessible pressure vessel to pressurize physiological Ca2+-buffered solutions at different fixed concentrations of free Ca2+ (1 nM to 25.6 μM) and a specified dye concentration (12 μM) to pressures of 200 MPa, and record dye fluorescence intensity. Our results show that Fluo-4 fluorescence intensity is reduced by 31% per 100 MPa, the intensity of Fura Red is reduced by 10% per 100 MPa. The mean reaction volume for the dissociation of calcium from the dye molecules [Formula: see text] is determined to -17.8 ml mol-1 for Fluo-4 and -21.3 ml mol-1 for Fura Red. Additionally, a model is presented that is used to correct for pressure-dependent changes in pH and binding affinity of Ca2+ to EGTA, as well as to determine the influence of these changes on dye fluorescence.

Indexed as

Aniline CompoundsBenzofuransBuffersCalciumEgtazic AcidFluorescent DyesHydrogen-Ion ConcentrationHydrostatic PressureImidazolesKineticsOsmolar ConcentrationSpectrometry, FluorescenceTemperatureXanthenesAniline CompoundsBenzofuransBuffersCalciumEgtazic AcidFluo 4Fluorescent Dyesfura redImidazolesXanthenes

Identifiers

PMID27764134
PMCPMC5072694
OpenAlexW2537655302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.