Evidence map›Paper›PMID 27764096›Full record

ArticlePLoS genetics2016

A Large Genome-Wide Association Study of Age-Related Hearing Impairment Using Electronic Health Records.

Thomas J Hoffmann, Bronya J Keats, Noriko Yoshikawa, Catherine Schaefer, Neil Risch, Lawrence R Lustig

Abstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed, 5 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 5 syntheses or guidelines pooled it.

  1. Pooled it
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  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Presbycusis: Pathology, Signal Pathways, and Therapeutic Strategy.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  12. Gene-Polymorphism in Non - Syndromic Hearing Loss: A Systematic Review.Indian journal of otolaryngology and head and neck surgery : official publication of the Association of Otolaryngologists of India · 2025
    Article
  13. Article
  14. Article
  15. Pharmacological Approaches to Hearing Loss.Pharmacological reviews · 2024
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Thomas J HoffmannDepartment of Epidemiology and Biostatistics, and Institute for Human Genetics, University of California San Francisco, San Francisco, United States of America.
Bronya J KeatsDepartment of Genetics, Louisiana State University Health Sciences Center, New Orleans, United States of America.
Noriko YoshikawaDepartment of Head and Neck Surgery, Kaiser Permanente Medical Center, Oakland, United States of America.
Catherine SchaeferKaiser Permanente Northern California Division of Research, Oakland, United States of America.ORCID http://orcid.org/0000-0003-2644-055X
Neil RischDepartment of Epidemiology and Biostatistics, and Institute for Human Genetics, University of California San Francisco, San Francisco, United States of America.
Lawrence R LustigDepartment of Otolaryngology-Head and Neck Surgery, Columbia University Medical Center, Columbia, United States of America.ORCID http://orcid.org/0000-0001-6718-9838

Funding

A Resource for Genetic Epidemiology Research in Adult Health and AgingRC2AG036607 · NIA · KAISER FOUNDATION RESEARCH INSTITUTE · PI RISCH, NEIL J., SCHAEFER, CATHERINE ANN · 2009 to 2010
$24.8M
Genome-wide Study of Hearing ImpairmentK01DC013300 · NIDCD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HOFFMANN, THOMAS · 2013 to 2017
$1.1M
Medical Research Council MC_QA137853NIA NIH HHS RC2 AG036607NIDCD NIH HHS K01 DC013300
6 · The paper itself

Abstract

Age-related hearing impairment (ARHI), one of the most common sensory disorders, can be mitigated, but not cured or eliminated. To identify genetic influences underlying ARHI, we conducted a genome-wide association study of ARHI in 6,527 cases and 45,882 controls among the non-Hispanic whites from the Genetic Epidemiology Research on Adult Health and Aging (GERA) cohort. We identified two novel genome-wide significant SNPs: rs4932196 (odds ratio = 1.185, p = 4.0x10-11), 52Kb 3' of ISG20, which replicated in a meta-analysis of the other GERA race/ethnicity groups (1,025 cases, 12,388 controls, p = 0.00094) and in a UK Biobank case-control analysis (30,802 self-reported cases, 78,586 controls, p = 0.015); and rs58389158 (odds ratio = 1.132, p = 1.8x10-9), which replicated in the UK Biobank (p = 0.00021). The latter SNP lies just outside exon 8 and is highly correlated (r2 = 0.96) with the missense SNP rs5756795 in exon 7 of TRIOBP, a gene previously associated with prelingual nonsyndromic hearing loss. We further tested these SNPs in phenotypes from audiologist notes available on a subset of GERA (4,903 individuals), stratified by case/control status, to construct an independent replication test, and found a significant effect of rs58389158 on speech reception threshold (SRT; overall GERA meta-analysis p = 1.9x10-6). We also tested variants within exons of 132 other previously-identified hearing loss genes, and identified two common additional significant SNPs: rs2877561 (synonymous change in ILDR1, p = 6.2x10-5), which replicated in the UK Biobank (p = 0.00057), and had a significant GERA SRT (p = 0.00019) and speech discrimination score (SDS; p = 0.0019); and rs9493627 (missense change in EYA4, p = 0.00011) which replicated in the UK Biobank (p = 0.0095), other GERA groups (p = 0.0080), and had a consistent significant result for SRT (p = 0.041) and suggestive result for SDS (p = 0.081). Large cohorts with GWAS data and electronic health records may be a useful method to characterize the genetic architecture of ARHI.

Indexed as

AdultAgingElectronic Health RecordsEthnicityExonucleasesExoribonucleasesFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHearing LossHumansMaleMicrofilament ProteinsPhenotypePolymorphism, Single NucleotideExonucleasesExoribonucleasesEYA4 protein, humanILDR1 protein, humanISG20 protein, humanMicrofilament ProteinsReceptors, Cell SurfaceTrans-ActivatorsTRIOBP protein, human

Identifiers

PMID27764096
PMCPMC5072625

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.