Evidence map›Paper›PMID 27762083›Full record

ArticleMicrobiologyOpen2017

The Rhodococcus equi virulence protein VapA disrupts endolysosome function and stimulates lysosome biogenesis.

Adam P Rofe, Luther J Davis, Jean L Whittingham, Elizabeth C Latimer-Bowman, Anthony J Wilkinson, Paul R Pryor

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Genomic diversity of multidrug-resistantApplied and environmental microbiology · 2026
    Article
  2. Antimicrobial Resistance inAntibiotics (Basel, Switzerland) · 2026
    Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Current Trends in Understanding and Managing Equine Rhodococcosis.Animals : an open access journal from MDPI · 2020
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Adam P RofeDepartment of Biology, Wentworth Way, University of York, York, UK.
Luther J DavisCambridge Institute for Medical Research and Department of Clinical Biochemistry, Addenbrooke's Hospital, University of Cambridge, Cambridge.
Jean L WhittinghamStructural Biology Laboratory, Department of Chemistry, University of York, York, UK.
Elizabeth C Latimer-BowmanCambridge Institute for Medical Research and Department of Clinical Biochemistry, Addenbrooke's Hospital, University of Cambridge, Cambridge.
Anthony J WilkinsonStructural Biology Laboratory, Department of Chemistry, University of York, York, UK.
Paul R PryorDepartment of Biology, Wentworth Way, University of York, York, UK.
University of York · GBAddenbrooke's Hospital · GBUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F016751/1Biotechnology and Biological Sciences Research Council BB/J007900/1
6 · The paper itself

Abstract

Rhodococcus equi (R. equi) is an important pulmonary pathogen in foals that often leads to the death of the horse. The bacterium harbors a virulence plasmid that encodes numerous virulence-associated proteins (Vaps) including VapA that is essential for intracellular survival inside macrophages. However, little is known about the precise function of VapA. Here, we demonstrate that VapA causes perturbation to late endocytic organelles with swollen endolysosome organelles having reduced Cathepsin B activity and an accumulation of LBPA, LC3 and Rab7. The data are indicative of a loss of endolysosomal function, which leads cells to upregulate lysosome biogenesis to compensate for the loss of functional endolysosomes. Although there is a high degree of homology of the core region of VapA to other Vap proteins, only the highly conserved core region of VapA, and not VapD of VapG, gives the observed effects on endolysosomes. This is the first demonstration of how VapA works and implies that VapA aids R. equi survival by reducing the impact of lysosomes on phagocytosed bacteria.

Indexed as

Actinomycetales InfectionsAnimalsBacterial ProteinsBase SequenceBronchopneumoniaCathepsin BCell Line, TumorGene Expression Regulation, BacterialHeLa CellsHorse DiseasesHorsesHumansLysosomesMacrophagesPhagocytosisRatsBacterial ProteinsCathepsin BVapA protein, Rhodococcus equiVirulence FactorsendolysosomelysosomeRhodococcus equiVapA

Identifiers

PMID27762083
PMCPMC5387311
OpenAlexW2539441240

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.