Evidence map›Paper›PMID 27761921›Full record

ArticleAnnals of neurology2016

Repeat-associated non-AUG translation from antisense CCG repeats in fragile X tremor/ataxia syndrome.

Amy Krans, Michael G Kearse, Peter K Todd

Abstract read
In one paragraph

Article in Annals of neurology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 67 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Mitochondrial Dysfunction in Repeat Expansion Diseases.Antioxidants (Basel, Switzerland) · 2023
    Review
  7. Article
  8. Review
  9. The polyG diseases: a new disease entity.Acta neuropathologica communications · 2022
    Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Measuring Repeat-Associated Non-AUG (RAN) Translation.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  15. GC-rich repeat expansions: associated disorders and mechanisms.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2021
    Article
  16. Article
  17. Article
  18. Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Amy KransDepartment of Neurology, University of Michigan, Ann Arbor, MI.
Michael G KearseDepartment of Neurology, University of Michigan, Ann Arbor, MI.
Peter K ToddDepartment of Neurology, University of Michigan, Ann Arbor, MI.
University of Michigan–Ann Arbor · US

Funding

Michigan Alzheimer's Disease Core CenterP30AG053760 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PAULSON, HENRY L · 2016 to 2020
$10.1M
Hexanucleotide repeat translation in ALS and Frontotemporal DementiaR01NS099280 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Peter K Todd · 2016 to 2026
$4.9M
CGG repeat associated translation in Fragile X-associated Tremor/Ataxia Syndrome-Diversity SupplementR01NS086810 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TODD, PETER K · 2014 to 2024
$4.1M
Mechanisms of CGG RAN translation in Fragile X-associated tremor/ataxia syndromeF32NS089124 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KEARSE, MICHAEL G · 2014 to 2015
$108k
Neuronal Dysfunction in Fragile X Tremor Ataxia SyndromeI01BX001689 · VA · VETERANS HEALTH ADMINISTRATION · PI TODD, PETER K · 2013 to 2016
–
BLRD VA I01 BX001689NIA NIH HHS P30 AG053760NINDS NIH HHS F32 NS089124NINDS NIH HHS R01 NS086810NINDS NIH HHS R01 NS099280
6 · The paper itself

Abstract

objectiveRepeat-associated non-AUG (RAN) translation drives production of toxic proteins from pathogenic repeat sequences in multiple untreatable neurodegenerative disorders. Fragile X-associated tremor/ataxia syndrome (FXTAS) is one such condition, resulting from a CGG trinucleotide repeat expansion in the 5' leader sequence of the FMR1 gene. RAN proteins from the CGG repeat accumulate in ubiquitinated inclusions in FXTAS patient brains and elicit toxicity. In addition to the CGG repeat, an antisense mRNA containing a CCG repeat is also transcribed from the FMR1 locus. We evaluated whether this antisense CCG repeat supports RAN translation and contributes to pathology in FXTAS patients.

methodsWe generated a series of CCG RAN translation-specific reporters and utilized them to measure RAN translation from CCG repeats in multiple reading frames in transfected cells. We also developed antibodies against predicted CCG RAN proteins and used immunohistochemistry and immunofluorescence on FXTAS patient tissues to measure their accumulation and distribution.

resultsRAN translation from CCG repeats is supported in all 3 potential reading frames, generating polyproline, polyarginine, and polyalanine proteins, respectively. Their production occurs whether or not the natural AUG start upstream of the repeat in the proline reading frame is present. All 3 frames show greater translation at larger repeat sizes. Antibodies targeted to the antisense FMR polyproline and polyalanine proteins selectively stain nuclear and cytoplasmic aggregates in FXTAS patients and colocalize with ubiquitinated neuronal inclusions.

interpretationRAN translation from antisense CCG repeats generates novel proteins that accumulate in ubiquitinated inclusions in FXTAS patients. Ann Neurol 2016;80:871-881.

Indexed as

AtaxiaFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeHumansProtein Biosynthesisran GTP-Binding ProteinRNA, AntisenseTremorTrinucleotide Repeat ExpansionFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1ran GTP-Binding ProteinRNA, Antisense

Identifiers

PMID27761921
PMCPMC5177492
OpenAlexW2560485036

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.