ArticleFrontiers in plant science2016
The Influence of Genotype and Environment on Small RNA Profiles in Grapevine Berry.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- The Role of Terroir on the Ripening Traits ofPlants (Basel, Switzerland) · 2024Article
- Investigating the impact of pedoclimatic conditions on the oenological performance of two red cultivars grown throughout southern Italy.Frontiers in plant science · 2023Article
- Secondary metabolites in grapevine: crosstalk of transcriptional, metabolic and hormonal signals controlling stress defence responses in berries and vegetative organs.Frontiers in plant science · 2023Review
- How Do Novel M-Rootstock (Plants (Basel, Switzerland) · 2020Article
- Tuscany Sangiovese grape juice imparts cardioprotection by regulating gene expression of cardioprotective C-type natriuretic peptide.European journal of nutrition · 2020Article
- Transcriptomic and biochemical investigations support the role of rootstock-scion interaction in grapevine berry quality.BMC genomics · 2020Article
- Small RNA Mobility: Spread of RNA Silencing Effectors and its Effect on Developmental Processes and Stress Adaptation in Plants.International journal of molecular sciences · 2019Review
- The Role of UV-B light on Small RNA Activity During Grapevine Berry Development.G3 (Bethesda, Md.) · 2019Article
- Distinct Metabolic Signals Underlie Clone by Environment Interplay in "Nebbiolo" Grapes Over Ripening.Frontiers in plant science · 2019Article
- MicroRNA profiling analysis of developing berries for 'Kyoho' and its early-ripening mutant during berry ripening.BMC plant biology · 2018Article
- miRVIT: A Novel miRNA Database and Its Application to UncoverFrontiers in plant science · 2018Article
- A Concise Review on Multi-Omics Data Integration for Terroir Analysis inFrontiers in plant science · 2017Review
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Authors and funding
8 authors.
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Abstract
Understanding the molecular mechanisms involved in the interaction between the genetic composition and the environment is crucial for modern viticulture. We approached this issue by focusing on the small RNA transcriptome in grapevine berries of the two varieties Cabernet Sauvignon and Sangiovese, growing in adjacent vineyards in three different environments. Four different developmental stages were studied and a total of 48 libraries of small RNAs were produced and sequenced. Using a proximity-based pipeline, we determined the general landscape of small RNAs accumulation in grapevine berries. We also investigated the presence of known and novel miRNAs and analyzed their accumulation profile. The results showed that the distribution of small RNA-producing loci is variable between the two cultivars, and that the level of variation depends on the vineyard. Differently, the profile of miRNA accumulation mainly depends on the developmental stage. The vineyard in Riccione maximizes the differences between the varieties, promoting the production of more than 1000 specific small RNA loci and modulating their expression depending on the cultivar and the maturation stage. In total, 89 known vvi-miRNAs and 33 novel vvi-miRNA candidates were identified in our samples, many of them showing the accumulation profile modulated by at least one of the factors studied. The
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