Evidence map›Paper›PMID 27760991›Full record

ArticleScientific reports2016

Identification of a regulation network in response to cadmium toxicity using blood clam Tegillarca granosa as model.

Yongbo Bao, Xiao Liu, Weiwei Zhang, Jianping Cao, Wei Li, Chenghua Li, Zhihua Lin

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yongbo BaoZhejiang Key Laboratory of Aquatic Germplasm Resources, College of Biological &Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, 315100, P.R. China.
Xiao LiuDepartment of Systems biology, GFK, Shanghai Biotech Inc., Shanghai, 201112, P.R. China.
Weiwei ZhangSchool of Marine Scienes, Ningbo University, Ningbo, Zhejiang, 315010, P.R. China.
Jianping CaoNingbo Yinzhou Measurement and Test Center for Quality and Technique Supervising, Ningbo, Zhejiang, 315100, P.R. China.
Wei LiZhejiang Key Laboratory of Aquatic Germplasm Resources, College of Biological &Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, 315100, P.R. China.
Chenghua LiSchool of Marine Scienes, Ningbo University, Ningbo, Zhejiang, 315010, P.R. China.
Zhihua LinZhejiang Key Laboratory of Aquatic Germplasm Resources, College of Biological &Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, 315100, P.R. China.
Zhejiang Wanli University · CNNingbo University · CNViva Biotech (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clam, a filter-feeding lamellibranch mollusk, is capable to accumulate high levels of trace metals and has therefore become a model for investigation the mechanism of heavy metal toxification. In this study, the effects of cadmium were characterized in the gills of Tegillarca granosa during a 96-hour exposure course using integrated metabolomic and proteomic approaches. Neurotoxicity and disturbances in energy metabolism were implicated according to the metabolic responses after Cd exposure, and eventually affected the osmotic function of gill tissue. Proteomic analysis showed that oxidative stress, calcium-binding and sulfur-compound metabolism proteins were key factors responding to Cd challenge. A knowledge-based network regulation model was constructed with both metabolic and proteomic data. The model suggests that Cd stimulation mainly inhibits a core regulation network that is associated with histone function, ribosome processing and tight junctions, with the hub proteins actin, gamma 1 and Calmodulin 1. Moreover, myosin complex inhibition causes abnormal tight junctions and is linked to the irregular synthesis of amino acids. For the first time, this study provides insight into the proteomic and metabolomic changes caused by Cd in the blood clam T. granosa and suggests a potential toxicological pathway for Cd.

Indexed as

Adaptation, PhysiologicalStress, PhysiologicalAnimalsArcidaeCadmiumGene Expression RegulationGene Regulatory NetworksGillsMetabolomeProteomeCadmiumProteome

Identifiers

PMID27760991
PMCPMC5071765
OpenAlexW2533443223

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.