Evidence map›Paper›PMID 27760386›Full record

ArticleComparative biochemistry and physiology. Toxicology & pharmacology : CBP2017

Spatiotemporal expression and transcriptional regulation of heme oxygenase and biliverdin reductase genes in zebrafish (Danio rerio) suggest novel roles during early developmental periods of heightened oxidative stress.

Andrew Holowiecki, Britton O'Shields, Matthew J Jenny

Open access · greenAbstract read
In one paragraph

Article in Comparative biochemistry and physiology. Toxicology & pharmacology : CBP, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

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  5. Loss ofBiomedicines · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Andrew HolowieckiDepartment of Biological Sciences, University of Alabama, Tuscaloosa, AL 35487, USA.
Britton O'ShieldsDepartment of Biological Sciences, University of Alabama, Tuscaloosa, AL 35487, USA.
Matthew J JennyDepartment of Biological Sciences, University of Alabama, Tuscaloosa, AL 35487, USA. Electronic address: mjjenny@ua.edu.
University of Alabama · US

Funding

Metal-Regulatory Factor 1 (MTF-1) Role in Development and Stress ResponseR00ES017044 · NIEHS · UNIVERSITY OF ALABAMA IN TUSCALOOSA · PI JENNY, MATTHEW J. · 2009 to 2011
$729k
NIEHS NIH HHS R00 ES017044
6 · The paper itself

Abstract

Heme oxygenase 1 (HMOX1) degrades heme into biliverdin, which is subsequently converted to bilirubin by biliverdin reductase (BVRa or BVRb) in a manner analogous to the classic anti-oxidant glutathione-recycling pathway. To gain a better understanding of the potential antioxidant roles the BVR enzymes may play during development, the spatiotemporal expression and transcriptional regulation of zebrafish hmox1a, bvra and bvrb were characterized under basal conditions and in response to pro-oxidant exposure. All three genes displayed spatiotemporal expression patterns consistent with classic hematopoietic progenitors during development. Transient knockdown of Nrf2a did not attenuate the ability to detect bvra or bvrb by ISH, or alter spatial expression patterns in response to cadmium exposure. While hmox1a:mCherry fluorescence was documented within the intermediate cell mass, a transient location of primitive erythrocyte differentiation, expression was not fully attenuated in Nrf2a morphants, but real-time RT-PCR demonstrated a significant reduction in hmox1a expression. Furthermore, Gata-1 knockdown did not attenuate hmox1a:mCherry fluorescence. However, while there was a complete loss of detection of bvrb expression by ISH at 24hpf, bvra expression was greatly attenuated but still detectable in Gata-1 morphants. In contrast, 96 hpf Gata-1 morphants displayed increased bvra and bvrb expression within hematopoietic tissues. Finally, temporal expression patterns of enzymes involved in the generation and maintenance of NADPH were consistent with known changes in the cellular redox state during early zebrafish development. Together, these data suggest that Gata-1 and Nrf2a play differential roles in regulating the heme degradation enzymes during an early developmental period of heightened cellular stress.

Indexed as

Heme Oxygenase-1Oxidative StressOxidoreductases Acting on CH-CH Group DonorsZebrafishZebrafish ProteinsAnimalsAnimals, Genetically ModifiedBinding SitesCadmium CompoundsGATA1 Transcription FactorGene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicGene Knockdown TechniquesHematopoiesisNADPNF-E2-Related Factor 2biliverdin reductaseCadmium Compoundsgata1a protein, zebrafishGATA1 Transcription FactorHeme Oxygenase-1heme oxygenase 1, zebrafishNADPnfe2l2a protein, zebrafishNF-E2-Related Factor 2Oxidoreductases Acting on CH-CH Group DonorsZebrafish ProteinsBiliverdin reductaseCadmiumGATA-1HematopoiesisHeme oxygenaseNRF2Oxidative stress

Identifiers

PMID27760386
PMCPMC5148680
OpenAlexW2538798056

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.