Evidence map›Paper›PMID 27760359›Full record

ArticleBiophysical journal2016

Mode of Action of a Designed Antimicrobial Peptide: High Potency against Cryptococcus neoformans.

Aritreyee Datta, Vikas Yadav, Anirban Ghosh, Jaesun Choi, Dipita Bhattacharyya, Rajiv K Kar, Humaira Ilyas, Arkajyoti Dutta, Eunseol An, Jayanta Mukhopadhyay and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. The Contribution of Human Antimicrobial Peptides to Fungi.International journal of molecular sciences · 2025
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. A saponin-polybromophenol antibiotic (CU1) fromCurrent research in pharmacology and drug discovery · 2022
    Article
  8. Fungicidal Activity of Recombinant Javanicin againstMolecules (Basel, Switzerland) · 2021
    Article
  9. A Novel Antimicrobial Peptide SparamosinFrontiers in microbiology · 2021
    Article
  10. Review
  11. Article
  12. Frontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Aritreyee DattaDepartment of Biophysics, P-1/12 CIT Scheme VII (M), Kolkata, India.
Vikas YadavMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
Anirban GhoshDepartment of Biophysics, P-1/12 CIT Scheme VII (M), Kolkata, India.
Jaesun ChoiDepartment of Fine Chemistry, Seoul National University of Science and Technology, Seoul, Korea.
Dipita BhattacharyyaDepartment of Biophysics, P-1/12 CIT Scheme VII (M), Kolkata, India.
Rajiv K KarDepartment of Biophysics, P-1/12 CIT Scheme VII (M), Kolkata, India.
Humaira IlyasDepartment of Biophysics, P-1/12 CIT Scheme VII (M), Kolkata, India.
Arkajyoti DuttaDepartment of Chemistry, Bose Institute, Kolkata, India.
Eunseol AnDepartment of Fine Chemistry, Seoul National University of Science and Technology, Seoul, Korea.
Jayanta MukhopadhyayDepartment of Chemistry, Bose Institute, Kolkata, India.
Dongkuk LeeDepartment of Fine Chemistry, Seoul National University of Science and Technology, Seoul, Korea.
Kaustuv SanyalMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
Ayyalusamy RamamoorthyBiophysics and Department of Chemistry, University of Michigan, Ann Arbor, Michigan.
Anirban BhuniaDepartment of Biophysics, P-1/12 CIT Scheme VII (M), Kolkata, India. Electronic address: anirbanbhunia@gmail.com.
Bose Institute · INSeoul National University of Science and Technology · KRJawaharlal Nehru Centre for Advanced Scientific Research · INUniversity of Michigan · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is a significant need for developing compounds that kill Cryptococcus neoformans, the fungal pathogen that causes meningoencephalitis in immunocompromised individuals. Here, we report the mode of action of a designed antifungal peptide, VG16KRKP (VARGWKRKCPLFGKGG) against C. neoformans. It is shown that VG16KRKP kills fungal cells mainly through membrane compromise leading to efflux of ions and cell metabolites. Intracellular localization, inhibition of in vitro transcription, and DNA binding suggest a secondary mode of action for the peptide, hinting at possible intracellular targets. Atomistic structure of the peptide determined by NMR experiments on live C. neoformans cells reveals an amphipathic arrangement stabilized by hydrophobic interactions among A2, W5, and F12, a conventional folding pattern also known to play a major role in peptide-mediated Gram-negative bacterial killing, revealing the importance of this motif. These structural details in the context of live cell provide valuable insights into the design of potent peptides for effective treatment of human and plant fungal infections.

Indexed as

Active Transport, Cell NucleusAmino Acid SequenceAntimicrobial Cationic PeptidesBase SequenceCell MembraneCell NucleusCryptococcus neoformansDNAModels, MolecularNucleic Acid ConformationAntimicrobial Cationic PeptidesDNA

Identifiers

PMID27760359
PMCPMC5071555
OpenAlexW2532860856

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.