Evidence map›Paper›PMID 27760121›Full record

ArticlePLoS genetics2016

The RTR Complex Partner RMI2 and the DNA Helicase RTEL1 Are Both Independently Involved in Preserving the Stability of 45S rDNA Repeats in Arabidopsis thaliana.

Sarah Röhrig, Susan Schröpfer, Alexander Knoll, Holger Puchta

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  11. Downregulation of BarleyFrontiers in plant science · 2021
    Article
  12. Article
  13. Review
  14. Review
  15. DNA- and DNA-Protein-Crosslink Repair in Plants.International journal of molecular sciences · 2019
    Review
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sarah RöhrigBotanical Institute II, Karlsruhe Institute of Technology, Karlsruhe, Germany.ORCID http://orcid.org/0000-0002-7558-478X
Susan SchröpferBotanical Institute II, Karlsruhe Institute of Technology, Karlsruhe, Germany.ORCID http://orcid.org/0000-0003-3249-2161
Alexander KnollBotanical Institute II, Karlsruhe Institute of Technology, Karlsruhe, Germany.
Holger PuchtaBotanical Institute II, Karlsruhe Institute of Technology, Karlsruhe, Germany.
Karlsruhe Institute of Technology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The stability of repetitive sequences in complex eukaryotic genomes is safeguarded by factors suppressing homologues recombination. Prominent in this is the role of the RTR complex. In plants, it consists of the RecQ helicase RECQ4A, the topoisomerase TOP3α and RMI1. Like mammals, but not yeast, plants harbor an additional complex partner, RMI2. Here, we demonstrate that, in Arabidopsis thaliana, RMI2 is involved in the repair of aberrant replication intermediates in root meristems as well as in intrastrand crosslink repair. In both instances, RMI2 is involved independently of the DNA helicase RTEL1. Surprisingly, simultaneous loss of RMI2 and RTEL1 leads to loss of male fertility. As both the RTR complex and RTEL1 are involved in suppression of homologous recombination (HR), we tested the efficiency of HR in the double mutant rmi2-2 rtel1-1 and found a synergistic enhancement (80-fold). Searching for natural target sequences we found that RTEL1 is required for stabilizing 45S rDNA repeats. In the double mutant with rmi2-2 the number of 45S rDNA repeats is further decreased sustaining independent roles of both factors in this process. Thus, loss of suppression of HR does not only lead to a destabilization of rDNA repeats but might be especially deleterious for tissues undergoing multiple cell divisions such as the male germline.

Indexed as

ArabidopsisArabidopsis ProteinsCarrier ProteinsChromosomal Proteins, Non-HistoneDNA HelicasesDNA RepairDNA, RibosomalDNA Topoisomerases, Type IHomologous RecombinationMeristemPlant RootsPollenRNA, RibosomalArabidopsis ProteinsCarrier ProteinsChromosomal Proteins, Non-HistoneDNA HelicasesDNA, RibosomalDNA Topoisomerases, Type IRecQ4A protein, ArabidopsisRMI1 protein, ArabidopsisRMI2 protein, ArabidopsisRNA, RibosomalRNA, ribosomal, 45SRTEL1 protein, Arabidopsis

Identifiers

PMID27760121
PMCPMC5070779
OpenAlexW2532769960

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.