Evidence map›Paper›PMID 27758867›Full record

ArticleThe Journal of biological chemistry2016

The Type B Flagellin of Hypervirulent Clostridium difficile Is Modified with Novel Sulfonated Peptidylamido-glycans.

Laura Bouché, Maria Panico, Paul Hitchen, Daniel Binet, Federico Sastre, Alexandra Faulds-Pain, Esmeralda Valiente, Evgeny Vinogradov, Annie Aubry, Kelly Fulton and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Laura BouchéFrom the Department of Life Sciences, Imperial College London, South Kensington Campus, London SW7 2AZ, United Kingdom.
Maria PanicoFrom the Department of Life Sciences, Imperial College London, South Kensington Campus, London SW7 2AZ, United Kingdom.
Paul HitchenFrom the Department of Life Sciences, Imperial College London, South Kensington Campus, London SW7 2AZ, United Kingdom.
Daniel BinetBioPharmaSpec, Suite 3.1 Lido Medical Centre, St. Saviours Road, Jersey JE2 7LA, United Kingdom.
Federico SastreFrom the Department of Life Sciences, Imperial College London, South Kensington Campus, London SW7 2AZ, United Kingdom.
Alexandra Faulds-Painthe Department of Pathogen Molecular Biology, London School of Hygiene and Tropical Medicine, Keppel Street, London WC1E 7HT, United Kingdom.
Esmeralda Valientethe Department of Pathogen Molecular Biology, London School of Hygiene and Tropical Medicine, Keppel Street, London WC1E 7HT, United Kingdom.
Evgeny Vinogradovthe Vaccine Program, Human Health Therapeutics Portfolio, National Research Council, Ottawa, Ontario K1A 0R6, Canada, and.
Annie Aubrythe Vaccine Program, Human Health Therapeutics Portfolio, National Research Council, Ottawa, Ontario K1A 0R6, Canada, and.
Kelly Fultonthe Vaccine Program, Human Health Therapeutics Portfolio, National Research Council, Ottawa, Ontario K1A 0R6, Canada, and.
Susan Twinethe Vaccine Program, Human Health Therapeutics Portfolio, National Research Council, Ottawa, Ontario K1A 0R6, Canada, and.
Susan M Loganthe Vaccine Program, Human Health Therapeutics Portfolio, National Research Council, Ottawa, Ontario K1A 0R6, Canada, and.
Brendan W Wrenthe Department of Pathogen Molecular Biology, London School of Hygiene and Tropical Medicine, Keppel Street, London WC1E 7HT, United Kingdom.
Anne DellFrom the Department of Life Sciences, Imperial College London, South Kensington Campus, London SW7 2AZ, United Kingdom, a.dell@imperial.ac.uk.ORCID http://orcid.org/0000-0003-1380-2347
Howard R MorrisFrom the Department of Life Sciences, Imperial College London, South Kensington Campus, London SW7 2AZ, United Kingdom.
Imperial College London · GBNational Research Council Canada · CAUniversity of London · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D521849/1Biotechnology and Biological Sciences Research Council BB/F008309/1Medical Research Council G1000214Medical Research Council MR/K000551/1Wellcome Trust 102979/Z/13/Z
6 · The paper itself

Abstract

Glycosylation of flagellins is a well recognized property of many bacterial species. In this study, we describe the structural characterization of novel flagellar glycans from a number of hypervirulent strains of C. difficile We used mass spectrometry (nano-LC-MS and MS/MS analysis) to identify a number of putative glycopeptides that carried a variety of glycoform substitutions, each of which was linked through an initial N-acetylhexosamine residue to Ser or Thr. Detailed analysis of a LLDGSSTEIR glycopeptide released by tryptic digestion, which carried two variant structures, revealed that the glycopeptide contained, in addition to carbohydrate moieties, a novel structural entity. A variety of electrospray-MS strategies using Q-TOF technology were used to define this entity, including positive and negative ion collisionally activated decomposition MS/MS, which produced unique fragmentation patterns, and high resolution accurate mass measurement to allow derivation of atomic compositions, leading to the suggestion of a taurine-containing peptidylamido-glycan structure. Finally, NMR analysis of flagellin glycopeptides provided complementary information. The glycan portion of the modification was assigned as α-Fuc3N-(1→3)-α-Rha-(1→2)-α-Rha3OMe-(1→3)-β-GlcNAc-(1→)Ser, and the novel capping moiety was shown to be comprised of taurine, alanine, and glycine. This is the first report of a novel O-linked sulfonated peptidylamido-glycan moiety decorating a flagellin protein.

Indexed as

Clostridioides difficileFlagellinGlycosylationNuclear Magnetic Resonance, BiomolecularPolysaccharides, BacterialflaB flagellinFlagellinPolysaccharides, BacterialbacteriaClostridium difficileflagellinglycosylationGram-positive bacteriamass spectrometry (MS)modificationnuclear magnetic resonance (NMR)sulfonated

Identifiers

PMID27758867
PMCPMC5207245
OpenAlexW2529716072

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.