Evidence map›Paper›PMID 27752141›Full record

ArticleScientific reports2016

Diabetes-linked transcription factor HNF4α regulates metabolism of endogenous methylarginines and β-aminoisobutyric acid by controlling expression of alanine-glyoxylate aminotransferase 2.

Dmitry V Burdin, Alexey A Kolobov, Chad Brocker, Alexey A Soshnev, Nikolay Samusik, Anton V Demyanov, Silke Brilloff, Natalia Jarzebska, Jens Martens-Lobenhoffer, Maren Mieth and 6 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  5. Pharmacogenomics of the Efficacy and Safety of Colchicine in COLCOT.Circulation. Genomic and precision medicine · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 3 countries.

Dmitry V BurdinDepartment of Physiology, Saint Petersburg State University, 199034 Saint Petersburg, Russia.
Alexey A KolobovDepartment of Biochemistry, Saint Petersburg State University, 199034 Saint Petersburg, Russia.
Chad BrockerNational Cancer Institute, NIH, Bethesda, MD, 20892, USA.
Alexey A SoshnevThe Rockefeller University, New York, NY, 10065, USA.
Nikolay SamusikStanford University School of Medicine, Stanford, CA, 94305, USA.
Anton V DemyanovInstitute of Highly Pure Biopreparations, 197110 Saint Petersburg, Russia.
Silke BrilloffUniversity Center for Vascular Medicine, Technische Universität Dresden, 01307 Dresden, Germany.
Natalia JarzebskaUniversity Center for Vascular Medicine, Technische Universität Dresden, 01307 Dresden, Germany.
Jens Martens-LobenhofferInstitute of Clinical Pharmacology, Otto-von-Guericke University, 39120 Magdeburg, Germany.
Maren MiethInstitute of Experimental and Clinical Pharmacology and Toxicology, Friedrich-Alexander-University Erlangen-Nürnberg (FAU), 91054 Erlangen, Germany.
Renke MaasInstitute of Experimental and Clinical Pharmacology and Toxicology, Friedrich-Alexander-University Erlangen-Nürnberg (FAU), 91054 Erlangen, Germany.
Stefan R BornsteinDepartment of Internal Medicine III, University Hospital Carl Gustav Carus, Technische Universität Dresden, 01307 Dresden, Germany.
Stefanie M Bode-BögerInstitute of Clinical Pharmacology, Otto-von-Guericke University, 39120 Magdeburg, Germany.
Frank GonzalezNational Cancer Institute, NIH, Bethesda, MD, 20892, USA.
Norbert WeissUniversity Center for Vascular Medicine, Technische Universität Dresden, 01307 Dresden, Germany.
Roman N RodionovUniversity Center for Vascular Medicine, Technische Universität Dresden, 01307 Dresden, Germany.
TU Dresden · DEFriedrich-Alexander-Universität Erlangen-Nürnberg · DENational Cancer Institute · USOtto-von-Guericke University Magdeburg · DESt Petersburg University · RURockefeller University · USStanford University · USState Research Institute of Highly Pure Biopreparations · RU

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Elevated levels of circulating asymmetric and symmetric dimethylarginines (ADMA and SDMA) predict and potentially contribute to end organ damage in cardiovascular diseases. Alanine-glyoxylate aminotransferase 2 (AGXT2) regulates systemic levels of ADMA and SDMA, and also of beta-aminoisobutyric acid (BAIB)-a modulator of lipid metabolism. We identified a putative binding site for hepatic nuclear factor 4 α (HNF4α) in AGXT2 promoter sequence. In a luciferase reporter assay we found a 75% decrease in activity of Agxt2 core promoter after disruption of the HNF4α binding site. Direct binding of HNF4α to Agxt2 promoter was confirmed by chromatin immunoprecipitation assay. siRNA-mediated knockdown of Hnf4a led to an almost 50% reduction in Agxt2 mRNA levels in Hepa 1-6 cells. Liver-specific Hnf4a knockout mice exhibited a 90% decrease in liver Agxt2 expression and activity, and elevated plasma levels of ADMA, SDMA and BAIB, compared to wild-type littermates. Thus we identified HNF4α as a major regulator of Agxt2 expression. Considering a strong association between human HNF4A polymorphisms and increased risk of type 2 diabetes our current findings suggest that downregulation of AGXT2 and subsequent impairment in metabolism of dimethylarginines and BAIB caused by HNF4α deficiency might contribute to development of cardiovascular complications in diabetic patients.

Indexed as

Aminoisobutyric AcidsAnimalsArginineCardiovascular DiseasesCell LineDiabetes Mellitus, Type 2Gene Expression RegulationHepatocyte Nuclear Factor 4HumansLiverMiceMice, Inbred C57BLMice, KnockoutPolymorphism, Single NucleotidePromoter Regions, GeneticRisk3-aminoisobutyric acidAlanine-glyoxylate transaminaseAminoisobutyric AcidsArgininedimethylarginineHepatocyte Nuclear Factor 4Hnf4a protein, mouseN,N-dimethylarginineRNA, Small Interferingsymmetric dimethylarginineTransaminases

Identifiers

PMID27752141
PMCPMC5067591
OpenAlexW2532020496

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.