Evidence map›Paper›PMID 27749085›Full record

ArticleGenetic testing and molecular biomarkers2016

Polymerase Chain Reaction-Electrospray-Time-of-Flight Mass Spectrometry Versus Culture for Bacterial Detection in Septic Arthritis and Osteoarthritis.

Michael P Palmer, Rachael Melton-Kreft, Laura Nistico, N Louisa Hiller, Leon H J Kim, Gregory T Altman, Daniel T Altman, Nicholas G Sotereanos, Fen Z Hu, Patrick J De Meo and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Genetic testing and molecular biomarkers, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Michael P Palmer1 88th Surgical Operations Squadron, Orthopedic Surgery , Wright-Patterson Airforce Base, Dayton, Ohio.
Rachael Melton-Kreft2 Center of Excellence in Biofilm Research , Allegheny Health Network, Pittsburgh, Pennsylvania.
Laura Nistico2 Center of Excellence in Biofilm Research , Allegheny Health Network, Pittsburgh, Pennsylvania.
N Louisa Hiller3 Department of Biological Sciences, Carnegie Mellon University , Pittsburgh, Pennsylvania.
Leon H J Kim3 Department of Biological Sciences, Carnegie Mellon University , Pittsburgh, Pennsylvania.
Gregory T Altman4 Department of Orthopaedic Surgery, Allegheny General Hospital , Pittsburgh, Pennsylvania.
Daniel T Altman4 Department of Orthopaedic Surgery, Allegheny General Hospital , Pittsburgh, Pennsylvania.
Nicholas G Sotereanos4 Department of Orthopaedic Surgery, Allegheny General Hospital , Pittsburgh, Pennsylvania.
Fen Z Hu5 Institute for Molecular Medicine and Infectious Disease, Center for Genomic Sciences, Drexel University College of Medicine , Philadelphia, Pennsylvania.
Patrick J De Meo4 Department of Orthopaedic Surgery, Allegheny General Hospital , Pittsburgh, Pennsylvania.
Garth D Ehrlich5 Institute for Molecular Medicine and Infectious Disease, Center for Genomic Sciences, Drexel University College of Medicine , Philadelphia, Pennsylvania.
Allegheny General Hospital · USAllegheny Health Network · USCarnegie Mellon University · USDrexel University · US

Funding

MOLECULAR ANALYSIS OF PATHOGENS IN OTITIS MEDIA BY PCRR01DC002148 · NIDCD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI EHRLICH, GARTH D. · 1994 to 2017
$6.5M
Impact of Antibiotics and Vaccines on the in vivo Evolution of S. pneumoniaeR01AI080935 · NIAID · ALLEGHENY-SINGER RESEARCH INSTITUTE · PI EHRLICH, GARTH D. · 2009 to 2010
$1.3M
NIAID NIH HHS R01 AI080935NIDCD NIH HHS R01 DC002148
6 · The paper itself

Abstract

backgroundPreliminary studies have identified known bacterial pathogens in the knees of patients with osteoarthritis (OA) before arthroplasty.

aimsThe current study was designed to determine the incidence and types of bacteria present in the synovial fluid of native knee joints from adult patients with diagnoses of septic arthritis and OA. PATIENTS AND

methodsPatients were enrolled between October 2010 and January 2013. Synovial fluid samples from the affected knee were collected and evaluated with both traditional microbial culture and polymerase chain reaction-electrospray ionization-time-of-flight mass spectrometry (molecular diagnostics [MDx]) to prospectively characterize the microbial content. Patients were grouped by diagnosis into one of two cohorts, those with clinical suspicion of septic arthritis (n = 44) and those undergoing primary arthroplasty of the knee for OA (n = 21). In all cases where discrepant culture and MDx results were obtained, we performed species-specific 16S rRNA fluorescence in situ hybridization (FISH) as a confirmatory test.

resultsMDx testing identified bacteria in 50% of the suspected septic arthritis cases and 29% of the arthroplasty cases, whereas culture detected bacteria in only 16% of the former and 0% of the latter group. The overall difference in detection rates for culture and MDx was very highly significant, p-value = 2.384 × 10

conclusionsMDx were more sensitive than culture, as confirmed by FISH. FISH only identifies bacteria that are embedded or infiltrated within the tissue and is thus not susceptible to contamination. Not all suspected cases of septic arthritis contain bacteria, but a significant percent of patients with OA, and no signs of infection, have FISH-confirmed bacterial biofilms present in the knee.

Indexed as

AdultArthritis, InfectiousBacterial Typing TechniquesFemaleHumansIn Situ Hybridization, FluorescenceMaleMass SpectrometryMolecular Diagnostic TechniquesOsteoarthritis, KneePolymerase Chain ReactionRNA, Ribosomal, 16SStaphylococcus aureusSynovial FluidRNA, Ribosomal, 16Sbacterial infectionfluorescent in situ hybridizationmolecular diagnosticsosteoarthritisseptic arthritis

Identifiers

PMID27749085
PMCPMC5180073
OpenAlexW2539255931

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.