Evidence map›Paper›PMID 27748356›Full record

ArticleScientific reports2016

Nanoimaging granule dynamics and subcellular structures in activated mast cells using soft X-ray tomography.

Huan-Yuan Chen, Dapi Meng-Lin Chiang, Zi-Jing Lin, Chia-Chun Hsieh, Gung-Chian Yin, I-Chun Weng, Peter Guttmann, Stephan Werner, Katja Henzler, Gerd Schneider and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Imaging cell morphology and physiology using X-rays.Biochemical Society transactions · 2019
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. PSF correction in soft X-ray tomography.Journal of structural biology · 2018
    Article
  14. Imaging FITC-dextran as a Reporter for Regulated Exocytosis.Journal of visualized experiments : JoVE · 2018
    Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Huan-Yuan ChenInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan, ROC.
Dapi Meng-Lin ChiangInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan, ROC.
Zi-Jing LinNational Synchrotron Radiation Research Center, Taiwan, ROC.
Chia-Chun HsiehNational Synchrotron Radiation Research Center, Taiwan, ROC.
Gung-Chian YinNational Synchrotron Radiation Research Center, Taiwan, ROC.
I-Chun WengInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan, ROC.
Peter GuttmannSoft Matter and Functional Materials, Helmholtz-Zentrum Berlin, Albert-Einstein-Str. 15, D-12489 Berlin, Germany.
Stephan WernerSoft Matter and Functional Materials, Helmholtz-Zentrum Berlin, Albert-Einstein-Str. 15, D-12489 Berlin, Germany.
Katja HenzlerSoft Matter and Functional Materials, Helmholtz-Zentrum Berlin, Albert-Einstein-Str. 15, D-12489 Berlin, Germany.
Gerd SchneiderSoft Matter and Functional Materials, Helmholtz-Zentrum Berlin, Albert-Einstein-Str. 15, D-12489 Berlin, Germany.
Lee-Jene LaiNational Synchrotron Radiation Research Center, Taiwan, ROC.
Fu-Tong LiuInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan, ROC.
Helmholtz-Zentrum Berlin für Materialien und Energie · DEInstitute of Biomedical Sciences, Academia Sinica · TWNational Synchrotron Radiation Research Center · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mast cells play an important role in allergic responses. During activation, these cells undergo degranulation, a process by which various kinds of mediators stored in the granules are released. Granule homeostasis in mast cells has mainly been studied by electron microscopy (EM), where the fine structures of subcellular organelles are partially destroyed during sample preparation. Migration and fusion of granules have not been studied in detail in three dimensions (3D) in unmodified samples. Here, we utilized soft X-ray tomography (SXT) coupled with fluorescence microscopy to study the detailed structures of organelles during mast cell activation. We observed granule fission, granule fusion to plasma membranes, and small vesicles budding from granules. We also detected lipid droplets, which became larger and more numerous as mast cells were activated. We observed dramatic morphological changes of mitochondria in activated mast cells and 3D-reconstruction revealed the highly folded cristae inner membrane, features of functionally active mitochondria. We also observed giant vesicles containing granules, mitochondria, and lipid droplets, which we designated as granule-containing vesicles (GCVs) and verified their presence by EM in samples prepared by cryo-substitution, albeit with a less clear morphology. Thus, our studies using SXT provide significant insights into mast cell activation at the organelle level.

Indexed as

AnaphylaxisAnimalsCell DegranulationCell LineCytoplasmic GranulesIntracellular SpaceMast CellsMicroscopy, ElectronMitochondriaNanotechnologyRatsTomography, X-Ray

Identifiers

PMID27748356
PMCPMC5066221
OpenAlexW2533770360

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.