Evidence map›Paper›PMID 27747563›Full record

ArticleBrain informatics2015

Identifying HIV-induced subgraph patterns in brain networks with side information.

Bokai Cao, Xiangnan Kong, Jingyuan Zhang, Philip S Yu, Ann B Ragin

Abstract read
In one paragraph

Article in Brain informatics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Bokai CaoDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA. caobokai@uic.edu.
Xiangnan KongDepartment of Computer Science, Worcester Polytechnic Institute, Worcester, MA, USA.
Jingyuan ZhangDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
Philip S YuDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
Ann B RaginDepartment of Radiology, Northwestern University, Chicago, IL, USA.

Funding

A Multiparametric MR Study of Early and Late Stage HIV InfectionR01MH080636 · NIMH · NORTHWESTERN UNIVERSITY AT CHICAGO · PI RAGIN, ANN B · 2007 to 2011
$1.6M
NIMH NIH HHS R01 MH080636
6 · The paper itself

Abstract

Investigating brain connectivity networks for neurological disorder identification has attracted great interest in recent years, most of which focus on the graph representation alone. However, in addition to brain networks derived from the neuroimaging data, hundreds of clinical, immunologic, serologic, and cognitive measures may also be documented for each subject. These measures compose multiple side views encoding a tremendous amount of supplemental information for diagnostic purposes, yet are often ignored. In this paper, we study the problem of subgraph selection from brain networks with side information guidance and propose a novel solution to find an optimal set of subgraph patterns for graph classification by exploring a plurality of side views. We derive a feature evaluation criterion, named gSide, to estimate the usefulness of subgraph patterns based upon side views. Then we develop a branch-and-bound algorithm, called gMSV, to efficiently search for optimal subgraph patterns by integrating the subgraph mining process and the procedure of discriminative feature selection. Empirical studies on graph classification tasks for neurological disorders using brain networks demonstrate that subgraph patterns selected by the multi-side-view-guided subgraph selection approach can effectively boost graph classification performances and are relevant to disease diagnosis.

Indexed as

Brain networkGraph miningSide informationSubgraph pattern

Identifiers

PMID27747563
PMCPMC4737668

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.