Evidence map›Paper›PMID 27745942›Full record

ArticleThe Journal of allergy and clinical immunology2017

The nasal methylome and childhood atopic asthma.

Ivana V Yang, Brent S Pedersen, Andrew H Liu, George T O'Connor, Dinesh Pillai, Meyer Kattan, Rana Tawil Misiak, Rebecca Gruchalla, Stanley J Szefler, Gurjit K Khurana Hershey and 14 more

Abstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed, 4 pooled it
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 4 syntheses or guidelines pooled it, 164 citations in OpenAlex.

  1. Pooled it
  2. Shared DNA methylation signatures in childhood allergy: The MeDALL study.The Journal of allergy and clinical immunology · 2021
    Pooled it
  3. Epigenome-wide meta-analysis of DNA methylation and childhood asthma.The Journal of allergy and clinical immunology · 2019
    Pooled it
  4. Pooled it
  5. Trial
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  15. Prenatal black carbon exposure and DNA methylation in umbilical cord blood.International journal of hygiene and environmental health · 2025
    Article
  16. Review
  17. Article
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  20. Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 12 institutions in 1 country.

Ivana V YangDepartment of Medicine and University of Colorado, School of Medicine, Aurora, Colo; National Jewish Health, Denver, Colo; Department of Epidemiology, Colorado School of Public Health, Aurora, Colo. Electronic address: ivana.yang@ucdenver.edu.
Brent S PedersenDepartment of Medicine and University of Colorado, School of Medicine, Aurora, Colo.
Andrew H LiuNational Jewish Health, Denver, Colo.
George T O'ConnorDepartment of Medicine, Boston University School of Medicine, Boston, Mass.
Dinesh PillaiChildren's National Health System, Washington, DC.
Meyer KattanColumbia University Medical Center, New York, NY.
Rana Tawil MisiakDepartment of Medicine, Henry Ford Hospital, Detroit, Mich.
Rebecca GruchallaUniversity of Texas, Southwestern Medical Center, Dallas, Tex.
Stanley J SzeflerDepartment of Pediatrics, Children's Hospital Colorado and University of Colorado, School of Medicine, Aurora, Colo.
Gurjit K Khurana HersheyCincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Carolyn KercsmarCincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Adam RichardsDepartment of Medicine and University of Colorado, School of Medicine, Aurora, Colo.
Allen D StevensNational Jewish Health, Denver, Colo.
Christena A KolakowskiNational Jewish Health, Denver, Colo.
Melanie MakhijaChildren's Hospital of Chicago, Chicago, Ill.
Christine A SorknessDepartment of Medicine, University of Wisconsin School of Medicine and Public Health, Madison, Wis.
Rebecca Z KrouseRho Federal Systems Division, Chapel Hill, NC.
Cynthia VisnessRho Federal Systems Division, Chapel Hill, NC.
Elizabeth J DavidsonDepartment of Medicine and University of Colorado, School of Medicine, Aurora, Colo.
Corinne E HennessyDepartment of Medicine and University of Colorado, School of Medicine, Aurora, Colo.
Richard J MartinNational Jewish Health, Denver, Colo.
Alkis TogiasNational Institute of Allergy and Infectious Diseases, Bethesda, Md; and University of Colorado, Aurora, CO.
William W BusseDepartment of Medicine, University of Wisconsin School of Medicine and Public Health, Madison, Wis.
David A SchwartzDepartment of Medicine and University of Colorado, School of Medicine, Aurora, Colo; National Jewish Health, Denver, Colo; Department of Immunology, University of Colorado, Aurora, Colo. Electronic address: david.schwartz@ucdenver.edu.
University of Colorado Denver · USNational Jewish Health · USCincinnati Children's Hospital Medical Center · USRho (United States) · USUniversity of Wisconsin–Madison · USBoston University · USChildren's National · USColumbia University Irving Medical Center · USComer Children's Hospital · USHenry Ford Hospital · USThe University of Texas Southwestern Medical Center · USUniversity of Colorado Anschutz Medical Campus · US

Funding

Transplantation GroupUM2AI117870 · NIAID · RHO FEDERAL SYSTEMS DIVISION, INC. · PI DAVID, GLORIA · 2015 to 2023
$208.1M
Inner City Asthma consortium 3 (ICAC3)UM1AI114271 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI GERN, JAMES E., JACKSON, DANIEL J · 2014 to 2021
$79.4M
Clinical and Translational Science Institute at Children's NationalUL1TR000075 · NCATS · CHILDREN'S RESEARCH INSTITUTE · PI GUAY-WOODFORD, LISA MARIE · 2012 to 2015
$13.7M
Project 3: Environmental Determinants of Host DefenseP01ES018181 · NIEHS · NATIONAL JEWISH HEALTH · PI SCHWARTZ, DAVID ALBERT · 2009 to 2013
$5.7M
Asthma: An Epidemic Caused by Epigenetics?R01HL101251 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI COSGROVE, GREGORY P, SCHWARTZ, DAVID ALBERT · 2009 to 2013
$3.1M
Inner-City Asthma Consortium-266025496-266025496N01AI025496 · NIAID · UNIVERSITY OF WISCONSIN · PI BUSSE, WILLIAM · 2002 to 2006
–
NCATS NIH HHS UL1 TR000075NHLBI NIH HHS R01 HL101251NIAID NIH HHS HHSN272200900052CNIAID NIH HHS N01 AI025496NIAID NIH HHS UM1 AI114271NIAID NIH HHS UM2 AI117870NIEHS NIH HHS P01 ES018181
6 · The paper itself

Abstract

backgroundGiven the strong environmental influence on both epigenetic marks and allergic asthma in children, the epigenetic alterations in respiratory epithelia might provide insight into allergic asthma.

objectiveWe sought to identify DNA methylation and gene expression changes associated with childhood allergic persistent asthma.

methodsWe compared genomic DNA methylation patterns and gene expression in African American children with persistent atopic asthma (n = 36) versus healthy control subjects (n = 36). Results were validated in an independent population of asthmatic children (n = 30) by using a shared healthy control population (n = 36) and in an independent population of white adult atopic asthmatic patients (n = 12) and control subjects (n = 12).

resultsWe identified 186 genes with significant methylation changes, differentially methylated regions or differentially methylated probes, after adjustment for age, sex, race/ethnicity, batch effects, inflation, and multiple comparisons. Genes differentially methylated included those with established roles in asthma and atopy and genes related to extracellular matrix, immunity, cell adhesion, epigenetic regulation, and airflow obstruction. The methylation changes were substantial (median, 9.5%; range, 2.6% to 29.5%). Hypomethylated and hypermethylated genes were associated with increased and decreased gene expression, respectively (P < 2.8 × 10

conclusionsEpigenetic marks in respiratory epithelia are associated with allergic asthma and gene expression changes in inner-city children.

Indexed as

DNA MethylationAdultAgedAged, 80 and overAsthmaBlack or African AmericanChildEpigenesis, GeneticFemaleGene Expression RegulationHumansMaleMiddle AgedNasal MucosaWhite PeopleYoung Adultatopic asthmaDNA methylationepigenetic regulationgene expressioninner citymicroarrayrespiratory epithelia

Identifiers

PMID27745942
PMCPMC5391298
OpenAlexW2530203919

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.