Evidence map›Paper›PMID 27745838›Full record

ArticleAmerican journal of human genetics2016

Association Study of Exon Variants in the NF-κB and TGFβ Pathways Identifies CD40 as a Modifier of Duchenne Muscular Dystrophy.

Luca Bello, Kevin M Flanigan, Robert B Weiss, United Dystrophinopathy Project, Pietro Spitali, Annemieke Aartsma-Rus, Francesco Muntoni, Irina Zaharieva, Alessandra Ferlini, Eugenio Mercuri and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 72 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 19 institutions in 8 countries.

Luca BelloCenter for Genetic Medicine Research, Children's National Medical Center, Washington, DC 20010, USA; Department of Neuroscience, University of Padova, 35128 Padova, Italy.
Kevin M FlaniganThe Center for Gene Therapy, Nationwide Children's Hospital, The Ohio State University, Columbus, OH 43205, USA; Department of Pediatrics, The Ohio State University, Columbus, OH 43205, USA; Department of Neurology, The Ohio State University, Columbus, OH 43205, USA.
Robert B WeissDepartment of Human Genetics, The University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
United Dystrophinopathy Project
Pietro SpitaliDepartment of Human Genetics, Leiden University Medical Center, 2333 ZA Leiden, The Netherlands.
Annemieke Aartsma-RusDepartment of Human Genetics, Leiden University Medical Center, 2333 ZA Leiden, The Netherlands; John Walton Muscular Dystrophy Research Centre, Institute of Genetic Medicine, Newcastle University, International Centre for Life, Newcastle upon Tyne NE1 3BZ, UK.
Francesco MuntoniDubowitz Neuromuscular Centre, University College London Institute of Child Health, London WC1N 1EH, UK.
Irina ZaharievaDubowitz Neuromuscular Centre, University College London Institute of Child Health, London WC1N 1EH, UK.
Alessandra FerliniDepartment of Medical Sciences, UOL of Medical Genetics, University of Ferrara, 44121 Ferrara, Italy.
Eugenio MercuriPaediatric Neuropsychiatry Unit, Policlinico Gemelli, Catholic University, 00168 Rome, Italy.
Sylvie Tuffery-GiraudLaboratory of Genetics of Rare Diseases, EA 7402, University of Montpellier, 34093 Montpellier, France.
Mireille ClaustresLaboratory of Genetics of Rare Diseases, EA 7402, University of Montpellier, 34093 Montpellier, France.
Volker StraubJohn Walton Muscular Dystrophy Research Centre, Institute of Genetic Medicine, Newcastle University, International Centre for Life, Newcastle upon Tyne NE1 3BZ, UK.
Hanns LochmüllerJohn Walton Muscular Dystrophy Research Centre, Institute of Genetic Medicine, Newcastle University, International Centre for Life, Newcastle upon Tyne NE1 3BZ, UK.
Andrea BarpDepartment of Neuroscience, University of Padova, 35128 Padova, Italy.
Sara VianelloDepartment of Neuroscience, University of Padova, 35128 Padova, Italy.
Elena PegoraroDepartment of Neuroscience, University of Padova, 35128 Padova, Italy.
Jaya PunethaCenter for Genetic Medicine Research, Children's National Medical Center, Washington, DC 20010, USA.
Heather Gordish-DressmanCenter for Genetic Medicine Research, Children's National Medical Center, Washington, DC 20010, USA.
Mamta GiriCenter for Genetic Medicine Research, Children's National Medical Center, Washington, DC 20010, USA.
Craig M McDonaldUniversity of California Davis Medical Center, Sacramento, CA 95817, USA.
Eric P HoffmanCenter for Genetic Medicine Research, Children's National Medical Center, Washington, DC 20010, USA. Electronic address: ehoffman@binghamton.edu.
Cooperative International Neuromuscular Research Group
Children's National · USLeiden University Medical Center · NLUniversity of Padua · ITCentre for Life · GBUniversité de Montpellier · FRUniversity College London · GBAgostino Gemelli University Polyclinic · ITUniversity of California Davis Medical Center · USUniversity of Ferrara · ITUniversity of Utah · USWashington University in St. Louis · USChild Development Center · QAChildren's Hospital at Westmead · AUKing's College London · GBMassachusetts General Hospital · USNationwide Children's Hospital · USRothamsted Research · GBStanford Medicine · USStollery Children's Hospital · CA

Funding

Genetic modifiers of Duchenne Muscular DystrophyR01NS085238 · NINDS · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI KEVIN M FLANIGAN, VERONICA J. VIELAND · 2014 to 2026
$8.6M
Clinically Meaningful Outcomes for Duchenne Muscular Dystrophy Therapeutic TrialsR01AR061875 · NIAMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI MCDONALD, CRAIG M. · 2011 to 2014
$1.3M
NIAMS NIH HHS R01 AR061875NINDS NIH HHS R01 NS085238
6 · The paper itself

Abstract

The expressivity of Mendelian diseases can be influenced by factors independent from the pathogenic mutation: in Duchenne muscular dystrophy (DMD), for instance, age at loss of ambulation (LoA) varies between individuals whose DMD mutations all abolish dystrophin expression. This suggests the existence of trans-acting variants in modifier genes. Common single nucleotide polymorphisms (SNPs) in candidate genes (SPP1, encoding osteopontin, and LTBP4, encoding latent transforming growth factor β [TGFβ]-binding protein 4) have been established as DMD modifiers. We performed a genome-wide association study of age at LoA in a sub-cohort of European or European American ancestry (n = 109) from the Cooperative International Research Group Duchenne Natural History Study (CINRG-DNHS). We focused on protein-altering variants (Exome Chip) and included glucocorticoid treatment as a covariate. As expected, due to the small population size, no SNPs displayed an exome-wide significant p value (< 1.8 × 10

Indexed as

Polymorphism, Single NucleotideAdolescentAllelesCase-Control StudiesCD40 AntigensChildDystrophinExonsGenes, ModifierGenome-Wide Association StudyGlucocorticoidsHumansLatent TGF-beta Binding ProteinsMuscular Dystrophy, DuchenneMutationNF-kappa BCD40 AntigensDystrophinGlucocorticoidsLatent TGF-beta Binding ProteinsLTBP4 protein, humanNF-kappa BOsteopontinSPP1 protein, humanTransforming Growth Factor beta

Identifiers

PMID27745838
PMCPMC5097949
OpenAlexW2531771252

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.