Evidence map›Paper›PMID 27743889›Full record

ArticleBiochemical and biophysical research communications2016

The TAR-RNA binding protein is required for immunoresponses triggered by Cardiovirus infection.

Akihiko Komuro, Yuya Homma, Takaharu Negoro, Glen N Barber, Curt M Horvath

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

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  7. RNA Helicase LGP2 Negatively Regulates RIG-I Signaling by Preventing TRIM25-Mediated Caspase Activation and Recruitment Domain Ubiquitination.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2019
    Article
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Akihiko KomuroDepartment of Biochemistry, Faculty of Pharmaceutical Sciences, Niigata University of Pharmacy and Applied Life Sciences, Niigata 956-8603, Japan. Electronic address: akikomuro@nupals.ac.jp.
Yuya HommaDepartment of Biochemistry, Faculty of Pharmaceutical Sciences, Niigata University of Pharmacy and Applied Life Sciences, Niigata 956-8603, Japan.
Takaharu NegoroDivision of Pharmacology, Faculty of Pharmaceutical Sciences, Teikyo Heisei University, Tokyo 164-8530, Japan.
Glen N BarberDepartment of Medicine and Sylvester Comprehensive Cancer Center, University of Miami School of Medicine, Miami, FL 33136, USA.
Curt M HorvathDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA.
Niigata University of Pharmacy and Applied Life Sciences · JPNorthwestern University · USSylvester Comprehensive Cancer Center · USTeikyo Heisei University · JP

Funding

The Role of STING in Innate ImmunityR01AI079336 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BARBER, GLEN N. · 2008 to 2019
$3.9M
Helicase Regulation of dsRNA Signaling and Innate Antiviral Immune ResponsesR01AI073919 · NIAID · NORTHWESTERN UNIVERSITY · PI HORVATH, CURT M · 2008 to 2012
$1.8M
Analysis of Novel Virus-Induced RNAsR01GM111652 · NIGMS · NORTHWESTERN UNIVERSITY · PI HORVATH, CURT M · 2015 to 2018
$1.2M
NIAID NIH HHS R01 AI073919NIAID NIH HHS R01 AI079336NIGMS NIH HHS R01 GM111652
6 · The paper itself

Abstract

LGP2 and MDA5 cooperate to detect viral RNA in the cytoplasm of Picornavirus-infected cells and activate innate immune responses. To further define regulatory components of RNA recognition by LGP2/MDA5, a yeast two-hybrid screen was used to identify LGP2-interacting proteins. The screening has identified the TAR-RNA binding protein (TRBP), which is known to be an essential factor for RNA interference (RNAi). Immuno-precipitation experiments demonstrated that TRBP interacted specifically with LGP2 but not with related RIG-I-like receptors, RIG-I or MDA5. siRNA knockdown experiments indicate that TRBP is important for Cardiovirus-triggered interferon responses, but TRBP is not involved in Sendai virus-triggered interferon response that is mediated mainly by RIG-I. To support functional interaction with LGP2, overexpressed TRBP increased Cardiovirus-triggered interferon promoter activity only when LGP2 and MDA5 are co-expressed but not MDA5 alone. Together, our findings illustrate a possible connection between an RNAi-regulatory factor and antiviral RNA recognition that is specifically required for a branch of the virus induced innate immune response.

Indexed as

Host-Pathogen InteractionsAnimalsCardiovirusCardiovirus InfectionsChlorocebus aethiopsDEAD Box Protein 58HEK293 CellsHumansInterferon-betaInterferon-Induced Helicase, IFIH1MicePromoter Regions, GeneticReceptors, ImmunologicRNA-Binding ProteinsRNA HelicasesRNA, Small InterferingDEAD Box Protein 58DHX58 protein, humanIFIH1 protein, humanInterferon-betaInterferon-Induced Helicase, IFIH1Receptors, ImmunologicRIGI protein, humanRNA-Binding ProteinsRNA HelicasesRNA, Small InterferingTrans-Activation Responsive RNA-Binding ProteinLGP2MDA5PicornavirusRIG-I-like receptorsTRBPType-I interferon

Identifiers

PMID27743889
PMCPMC7720272
OpenAlexW2529948857

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.