Evidence map›Paper›PMID 27742838›Full record

ArticleThe Journal of biological chemistry2016

Modulating the Effects of the Bacterial Chaperonin GroEL on Fibrillogenic Polypeptides through Modification of Domain Hinge Architecture.

Naoya Fukui, Kiho Araki, Kunihiro Hongo, Tomohiro Mizobata, Yasushi Kawata

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Proteomic Response ofBiomolecules · 2019
    Article
  7. Acid-denatured small heat shock protein HdeA fromThe Journal of biological chemistry · 2019
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Naoya FukuiFrom the Department of Chemistry and Biotechnology, Graduate School of Engineering, and.
Kiho ArakiFrom the Department of Chemistry and Biotechnology, Graduate School of Engineering, and.
Kunihiro HongoFrom the Department of Chemistry and Biotechnology, Graduate School of Engineering, and.
Tomohiro MizobataFrom the Department of Chemistry and Biotechnology, Graduate School of Engineering, and.
Yasushi KawataFrom the Department of Chemistry and Biotechnology, Graduate School of Engineering, and kawata@bio.tottori-u.ac.jp.
Kumamoto University · JPTottori University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The isolated apical domain of the Escherichia coli GroEL subunit displays the ability to suppress the irreversible fibrillation of numerous amyloid-forming polypeptides. In previous experiments, we have shown that mutating Gly-192 (located at hinge II that connects the apical domain and the intermediate domain) to a tryptophan results in an inactive chaperonin whose apical domain is disoriented. In this study, we have utilized this disruptive effect of Gly-192 mutation to our advantage, by substituting this residue with amino acid residues of varying van der Waals volumes with the intent to modulate the affinity of GroEL toward fibrillogenic peptides. The affinities of GroEL toward fibrillogenic polypeptides such as Aβ(1-40) (amyloid-β(1-40)) peptide and α-synuclein increased in accordance to the larger van der Waals volume of the substituent amino acid side chain in the G192X mutants. When we compared the effects of wild-type GroEL and selected GroEL G192X mutants on α-synuclein fibril formation, we found that the effects of the chaperonin on α-synuclein fibrillation were different; the wild-type chaperonin caused changes in both the initial lag phase and the rate of fibril extension, whereas the effects of the G192X mutants were more specific toward the nucleus-forming lag phase. The chaperonins also displayed differential effects on α-synuclein fibril morphology, suggesting that through mutation of Gly-192, we may induce changes to the intermolecular affinities between GroEL and α-synuclein, leading to more efficient fibril suppression, and in specific cases, modulation of fibril morphology.

Indexed as

Protein Aggregatesalpha-SynucleinAmino Acid SubstitutionAmyloid beta-PeptidesChaperonin 60Escherichia coliEscherichia coli ProteinsHumansMutation, MissensePeptide Fragmentsalpha-SynucleinAmyloid beta-Peptidesamyloid beta-protein (1-40)Chaperonin 60Escherichia coli ProteinsPeptide FragmentsProtein AggregatesSNCA protein, humanalpha-synuclein (a-synuclein)amyloid fibrilschaperoninGroELprotein aggregationprotein engineeringprotein misfoldingprotein-protein interaction

Identifiers

PMID27742838
PMCPMC5122787
OpenAlexW2530034820

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.