Evidence map›Paper›PMID 27742548›Full record

ArticleExperimental eye research2016

Complete metabolome and lipidome analysis reveals novel biomarkers in the human diabetic corneal stroma.

Shrestha Priyadarsini, Tina B McKay, Akhee Sarker-Nag, Jeremy Allegood, Charles Chalfant, Jian-Xing Ma, Dimitrios Karamichos

Open access · greenAbstract read
In one paragraph

Article in Experimental eye research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Review
  3. Diabetic keratopathy and nuclear proteins (Review).Molecular medicine reports · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. An untargeted metabolomics approach to study changes of the medium during human cornea culture.Metabolomics : Official journal of the Metabolomic Society · 2024
    Article
  10. Article
  11. Article
  12. Differential lipid signaling from CD4Frontiers in immunology · 2024
    Article
  13. Skewing cPLAScience signaling · 2023
    Article
  14. Review
  15. Review
  16. Article
  17. Monocarboxylate Transporters: Role and Regulation in Corneal Diabetes.Analytical cellular pathology (Amsterdam) · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Shrestha PriyadarsiniDepartment of Ophthalmology/Dean McGee Eye Institute, University of Oklahoma Health Sciences Center, Oklahoma City, OK, 73104, USA.
Tina B McKayDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, 73104, USA.
Akhee Sarker-NagDepartment of Ophthalmology/Dean McGee Eye Institute, University of Oklahoma Health Sciences Center, Oklahoma City, OK, 73104, USA.
Jeremy AllegoodHunter Holmes McGuire Veterans Administration Medical Center, Richmond, VA, USA; Department of Biochemistry and Molecular Biology, School of Medicine, Virginia Commonwealth University, Richmond, VA, USA; The VCU Johnson Center, Richmond, VA, USA; The VCU Massey Cancer Center, Richmond, VA, USA.
Charles ChalfantHunter Holmes McGuire Veterans Administration Medical Center, Richmond, VA, USA; Department of Biochemistry and Molecular Biology, School of Medicine, Virginia Commonwealth University, Richmond, VA, USA; The VCU Johnson Center, Richmond, VA, USA; The VCU Massey Cancer Center, Richmond, VA, USA.
Jian-Xing MaDepartment of Physiology Harold Hamm Diabetes Center, The University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Dimitrios KaramichosDepartment of Ophthalmology/Dean McGee Eye Institute, University of Oklahoma Health Sciences Center, Oklahoma City, OK, 73104, USA; Department of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, 73104, USA. Electronic address: dimitrios-karamichos@ouhsc.edu.
Dean McGee Eye Institute · USUniversity of Oklahoma Health Sciences Center · USVirginia Commonwealth University · US

Funding

Virus Vector Shared ResourceP30CA016059 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Kim Felder Rhoads · 1985 to 2026
$51.0M
P30-CENTER CORE GRANT FOR VISION RESEARCHP30EY021725 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Michelle C Callegan, MICHAEL H ELLIOTT · 2011 to 2026
$10.5M
The functional role of the cPLA2alpha/C1P interaction in sepsis resolutionR01HL125353 · NHLBI · VIRGINIA COMMONWEALTH UNIVERSITY · PI BROWN, RHODERICK E, CHALFANT, CHARLES E. · 2014 to 2018
$4.0M
Transplantation of a self-assembled corneal substituteR01EY020886 · NEI · SCHEPENS EYE RESEARCH INSTITUTE · PI KARAMICHOS, DIMITRIOS, ZIESKE, JAMES D · 2011 to 2014
$1.9M
Regulation of caspase 9 RNA splicing in NSCLC cancerR01CA154314 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHALFANT, CHARLES E. · 2011 to 2014
$1.2M
Documentation of Novel Keratoconus Markers: In Vitro and In VivoR01EY023568 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI KARAMICHOS, DIMITRIOS · 2013 to 2015
$1.1M
Vision Science Training ProgramT32EY023202 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI CALLEGAN, MICHELLE C · 2014 to 2025
$952k
AB SCIEX 5500 QTRAP Mass Spectrometer for Lipidomics and Metabolomics ResearchS10OD010641 · OD · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHALFANT, CHARLES E. · 2012 to 2012
$578k
The role of the C1P/cPLA2alpha interaction in anaphylaxisR21AI109068 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHALFANT, CHARLES E. · 2014 to 2015
$419k
The role of RNA splicing in non-small cell lung cancerI01BX001792 · VA · VA VETERANS ADMINISTRATION HOSPITAL · PI CHALFANT, CHARLES E. · 2013 to 2024
–
BLRD VA I01 BX001792NCI NIH HHS P30 CA016059NCI NIH HHS R01 CA154314NEI NIH HHS P30 EY021725NEI NIH HHS R01 EY020886NEI NIH HHS R01 EY023568NEI NIH HHS T32 EY023202NHLBI NIH HHS R01 HL125353NIAID NIH HHS R21 AI109068NIH HHS S10 OD010641
6 · The paper itself

Abstract

Prolonged hyperglycemia during diabetes mellitus can cause severe ophthalmic complications affecting both the anterior and posterior ocular segments leading to impaired vision or blindness. Diabetes-induced corneal pathologies are associated with decreased wound healing capacity, corneal edema, and altered epithelial basement membrane. The mechanism by which diabetes modulates structure and function within the corneal stroma are unknown. In our study, we characterized the effects of diabetes on extracellular matrix, lipid transport, and cellular metabolism by defining the entire metabolome and lipidome of Type 1 and Type 2 human diabetic corneal stroma. Significant increases in Collagen I and III were found in diabetic corneas suggesting that diabetes promotes defects in matrix structure leading to scarring. Furthermore, increased lipid content, including sphingosine-1-phosphate and dihydrosphingosine, in diabetic corneas compared to healthy controls were measured suggesting altered lipid retention. Metabolomics analysis identified elevated tryptophan metabolites, independent of glucose metabolism, which correlated with upregulation of the Kynurenine pathway in diabetic corneas. We also found significant upregulation of novel biomarkers aminoadipic acid, D,L-pipecolic acid, and dihydroorotate. Our study links aberrant tryptophan metabolism to end-stage pathologies associated with diabetes indicating the potential of the Kynurenine pathway as a therapeutic target for inhibiting diabetes-associated defects in the eye.

Indexed as

AdultAgedAged, 80 and overBiomarkersCollagen Type IIICorneal DiseasesCorneal StromaDiabetes Mellitus, Type 1Diabetes Mellitus, Type 2FemaleHumansLipidsMaleMass SpectrometryMetabolomeMiddle AgedBiomarkersCollagen Type IIILipidsSphingosineCellular metabolismCorneal fibrosisDiabetes mellitusKynurenineLipidomics

Identifiers

PMID27742548
PMCPMC5317205
OpenAlexW2530685046

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.