Evidence map›Paper›PMID 27738551›Full record

ArticleCellular logistics

An improved reversibly dimerizing mutant of the FK506-binding protein FKBP.

Juan J Barrero, Effrosyni Papanikou, Jason C Casler, Kasey J Day, Benjamin S Glick

Open access · hybridAbstract read
In one paragraph

Article in Cellular logistics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  7. Review
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  9. Article
  10. Review
  11. Article
  12. Article
  13. Visualizing Secretory Cargo Transport in Budding Yeast.Current protocols in cell biology · 2019
    Article
  14. Article
  15. Article
  16. FKBP Ligands-Where We Are and Where to Go?Frontiers in pharmacology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Juan J BarreroDepartment of Molecular Genetics and Cell Biology, University of Chicago , Chicago, IL, USA.
Effrosyni PapanikouDepartment of Molecular Genetics and Cell Biology, University of Chicago , Chicago, IL, USA.
Jason C CaslerDepartment of Molecular Genetics and Cell Biology, University of Chicago , Chicago, IL, USA.
Kasey J DayDepartment of Molecular Genetics and Cell Biology, University of Chicago , Chicago, IL, USA.
Benjamin S GlickDepartment of Molecular Genetics and Cell Biology, University of Chicago , Chicago, IL, USA.
University of Chicago · US

Funding

Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
Dissecting the functions of yeast COPI - Resubmission 01R01GM104010 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S · 2013 to 2020
$3.2M
NIGMS NIH HHS R01 GM104010NIGMS NIH HHS T32 GM007183
6 · The paper itself

Abstract

FK506-binding protein (FKBP) is a monomer that binds to FK506, rapamycin, and related ligands. The F36M substitution, in which Phe36 in the ligand-binding pocket is changed to Met, leads to formation of antiparallel FKBP dimers, which can be dissociated into monomers by ligand binding. This FKBP(M) mutant has been employed in the mammalian secretory pathway to generate aggregates that can be dissolved by ligand addition to create cargo waves. However, when testing this approach in yeast, we found that dissolution of FKBP(M) aggregates was inefficient. An improved reversibly dimerizing FKBP formed aggregates that dissolved more readily. This FKBP(L,V) mutant carries the F36L mutation, which increases the affinity of ligand binding, and the I90V mutation, which accelerates ligand-induced dissociation of the dimers. The FKBP(L,V) mutant expands the utility of reversibly dimerizing FKBP.

Indexed as

dimerizationF36MFK506-binding proteinFKBPregulatable secretory cargo

Identifiers

PMID27738551
PMCPMC5058350
OpenAlexW2463083241

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.