Evidence map›Paper›PMID 27737711›Full record

ArticleJournal of translational medicine2016

Prognostic impact of KRAS, NRAS, BRAF, and PIK3CA mutations in primary colorectal carcinomas: a population-based study.

Grazia Palomba, Valentina Doneddu, Antonio Cossu, Panagiotis Paliogiannis, Antonella Manca, Milena Casula, Maria Colombino, Annamaria Lanzillo, Efisio Defraia, Antonio Pazzola and 15 more

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 3 institutions in 1 country.

Grazia PalombaInstitute of Biomolecular Chemistry, CNR, Sassari, Italy.
Valentina DonedduDepartment of Surgical, Microsurgical and Medical Sciences, University of Sassari, Viale San Pietro 43, 07100, Sassari, PC, Italy.
Antonio CossuDepartment of Surgical, Microsurgical and Medical Sciences, University of Sassari, Viale San Pietro 43, 07100, Sassari, PC, Italy.
Panagiotis PaliogiannisDepartment of Surgical, Microsurgical and Medical Sciences, University of Sassari, Viale San Pietro 43, 07100, Sassari, PC, Italy. panospaliogiannis@gmail.com.ORCID 0000-0001-5485-6056
Antonella MancaInstitute of Biomolecular Chemistry, CNR, Sassari, Italy.
Milena CasulaInstitute of Biomolecular Chemistry, CNR, Sassari, Italy.
Maria ColombinoInstitute of Biomolecular Chemistry, CNR, Sassari, Italy.
Annamaria LanzilloOncology Unit, Businco Hospital, Cagliari, Italy.
Efisio DefraiaOncology Unit, Businco Hospital, Cagliari, Italy.
Antonio PazzolaMedical Oncology Unit, University-Hospital of Sassari (AOU), Sassari, Italy.
Giovanni SannaMedical Oncology Unit, University-Hospital of Sassari (AOU), Sassari, Italy.
Carlo PutzuMedical Oncology Unit, University-Hospital of Sassari (AOU), Sassari, Italy.
Salvatore OrtuOncology Unit, Local Health Agency, Olbia, Italy.
Mario ScartozziDepartment of Medical Oncology, University of Cagliari, Cagliari, Italy.
Maria Teresa IontaDepartment of Medical Oncology, University of Cagliari, Cagliari, Italy.
Giovanni BaldinoOncology Unit, Civil Hospital, Alghero, Italy.
Giuseppina SarobbaOncology Unit, Zonchello Hospital, Nuoro, Italy.
Francesca CapelliOncology Unit, Zonchello Hospital, Nuoro, Italy.
Tito SeddaOncology Unit, Local Health Agency, Oristano, Italy.
Luciano VirdisOncology Unit, Local Health Agency, Carbonia-Iglesias, Italy.
Michela BarcaOncology Unit, Local Health Agency, Lanusei, Italy.
Giulia GramignanoOncology Unit, Local Health Agency, Lanusei, Italy.
Mario BudroniDepartment of Surgical, Microsurgical and Medical Sciences, University of Sassari, Viale San Pietro 43, 07100, Sassari, PC, Italy.
Francesco TandaDepartment of Surgical, Microsurgical and Medical Sciences, University of Sassari, Viale San Pietro 43, 07100, Sassari, PC, Italy.
Giuseppe PalmieriInstitute of Biomolecular Chemistry, CNR, Sassari, Italy.
University of Sassari · ITAgenzia Regionale per la Protezione Ambientale del Piemonte · ITUniversity of Cagliari · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundActivation of oncogenes downstream the EGFR gene contributes to colorectal tumorigenesis and determines the sensitivity to anti-EGFR treatments. The aim of this study was to evaluate the prognostic value of KRAS, BRAF, NRAS and PIK3CA mutations in a large collection of CRC patients from genetically-homogeneous Sardinian population.

methodsA total of 1284 Sardinian patients with histologically-proven diagnosis of colorectal carcinoma (CRC) and presenting with metastatic disease were included into the study. Genomic DNA was isolated from formalin-fixed, paraffin-embedded primary tumour tissue samples of CRC patients and screened for mutations in RAS and BRAF genes, using pyrosequencing assays, and in PIK3CA gene, using automated DNA sequencing assays.

resultsOverall, mutation rates were 35.6 % for KRAS, 4.1 % for NRAS, and 2.1 % for BRAF. Among available DNA samples, 114/796 (14.3 %) primary CRCs were found to carry a mutation in the PIK3CA gene. In this subset of patients analysed in all four genes, a pathogenetic mutation of at least one gene was discovered in about half (378/796; 47.5 %) of CRC cases. A mutated BRAF gene was found to steadily act as a negative prognostic factor for either time to progression as metastatic disease (from detection of primary CRC to diagnosis of first distant metastasis; p = 0.009) or partial survival (from diagnosis of advanced disease to the time of death or last control; p = 0.006) or overall survival (p < 0.001). No significant impact on prognosis was observed for mutated KRAS, NRAS, and PIK3CA genes or combined RAS mutations (all RAS).

conclusionsOur study defines both prevalence and prognostic role of main activated oncogenes in a population-based large collection of CRC patients.

Indexed as

AdultAgedAged, 80 and overClass I Phosphatidylinositol 3-KinasesColorectal NeoplasmsFemaleGenetic Association StudiesGenetic TestingGeographyGTP PhosphohydrolasesHumansItalyKaplan-Meier EstimateMaleMembrane ProteinsMiddle AgedClass I Phosphatidylinositol 3-KinasesGTP PhosphohydrolasesKRAS protein, humanMembrane ProteinsNRAS protein, humanPIK3CA protein, humanProto-Oncogene Proteins B-rafProto-Oncogene Proteins p21(ras)BRAFColorectal cancerKRASNRASPIC3CA

Identifiers

PMID27737711
PMCPMC5064898
OpenAlexW2530077643

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.