Evidence map›Paper›PMID 27736862›Full record

ArticlePloS one2016

Genetic Determinism of Sensitivity to Corynespora cassiicola Exudates in Rubber Tree (Hevea brasiliensis).

Dinh Minh Tran, André Clément-Demange, Marine Déon, Dominique Garcia, Vincent Le Guen, Anne Clément-Vidal, Mouman Soumahoro, Aurélien Masson, Philippe Label, Mau Tuy Le and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 39 citations in OpenAlex.

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  7. Genome-Wide Analysis ofFrontiers in microbiology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Dinh Minh TranRubber Research Institute of Vietnam, Ho Chi Minh City, Vietnam.
André Clément-DemangeCIRAD, UMR-AGAP, F-34398 Montpellier, France.
Marine DéonUCA, INRA, UMR PIAF, 63000 Clermont-Ferrand, France.
Dominique GarciaCIRAD, UMR-AGAP, F-34398 Montpellier, France.
Vincent Le GuenCIRAD, UMR-AGAP, F-34398 Montpellier, France.
Anne Clément-VidalCIRAD, UMR-AGAP, F-34398 Montpellier, France.
Mouman SoumahoroSociété Africaine de Plantations d'Hévéas, 01 BP 1322 Abidjan 01, Côte d'Ivoire.
Aurélien MassonSociété des Caoutchoucs de Grand-Béréby, Grand-Béréby, Côte d'Ivoire.
Philippe LabelUCA, INRA, UMR PIAF, 63000 Clermont-Ferrand, France.
Mau Tuy LeRubber Research Institute of Vietnam, Ho Chi Minh City, Vietnam.
Valérie Pujade-RenaudCIRAD, UMR-AGAP, F-63000 Clermont-Ferrand, France.
Genetic Improvement and Adaptation of Mediterranean and Tropical Plants · FRSociété de Développement des Forêts · CI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An indirect phenotyping method was developed in order to estimate the susceptibility of rubber tree clonal varieties to Corynespora Leaf Fall (CLF) disease caused by the ascomycete Corynespora cassiicola. This method consists in quantifying the impact of fungal exudates on detached leaves by measuring the induced electrolyte leakage (EL%). The tested exudates were either crude culture filtrates from diverse C. cassiicola isolates or the purified cassiicolin (Cas1), a small secreted effector protein produced by the aggressive isolate CCP. The test was found to be quantitative, with the EL% response proportional to toxin concentration. For eight clones tested with two aggressive isolates, the EL% response to the filtrates positively correlated to the response induced by conidial inoculation. The toxicity test applied to 18 clones using 13 toxinic treatments evidenced an important variability among clones and treatments, with a significant additional clone x treatment interaction effect. A genetic linkage map was built using 306 microsatellite markers, from the F1 population of the PB260 x RRIM600 family. Phenotyping of the population for sensitivity to the purified Cas1 effector and to culture filtrates from seven C. cassiicola isolates revealed a polygenic determinism, with six QTL detected on five chromosomes and percentages of explained phenotypic variance varying from 11 to 17%. Two common QTL were identified for the CCP filtrate and the purified cassiicolin, suggesting that Cas1 may be the main effector of CCP filtrate toxicity. The CCP filtrate clearly contrasted with all other filtrates. The toxicity test based on Electrolyte Leakage Measurement offers the opportunity to assess the sensitivity of rubber genotypes to C. cassiicola exudates or purified effectors for genetic investigations and early selection, without risk of spreading the fungus in plantations. However, the power of this test for predicting field susceptibility of rubber clones to CLF will have to be further investigated.

Indexed as

AllelesAscomycotaGenotypeHeveaMicrosatellite RepeatsPhenotypePlant DiseasesPlant LeavesQuantitative Trait Loci

Identifiers

PMID27736862
PMCPMC5063417
OpenAlexW2531232554

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.