Evidence map›Paper›PMID 27735863›Full record

ArticleInternational journal of molecular sciences2016

A Comprehensive Characterization of Mitochondrial Genome in Papillary Thyroid Cancer.

Xingyun Su, Weibin Wang, Guodong Ruan, Min Liang, Jing Zheng, Ye Chen, Huiling Wu, Thomas J Fahey, Minxin Guan, Lisong Teng

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
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  5. Article
  6. Article
  7. Review
  8. Toward Systems-Level Metabolic Analysis in Endocrine Disorders and Cancer.Endocrinology and metabolism (Seoul, Korea) · 2023
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Current Knowledge in Thyroid Cancer-From Bench to Bedside.International journal of molecular sciences · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xingyun SuDepartment of Surgical Oncology, First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China. luckymaimai@sina.cn.
Weibin WangDepartment of Surgical Oncology, First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China. wbwang@zju.edu.cn.
Guodong RuanDepartment of Oncology, the Second Hospital of Shaoxing, Shaoxing 312000, China. recardos@163.com.
Min LiangInstitute of Genetics, School of Medicine, Zhejiang University, Hangzhou 310058, China. liangmin85685@126.com.
Jing ZhengInstitute of Genetics, School of Medicine, Zhejiang University, Hangzhou 310058, China. candy88zj@zju.edu.cn.
Ye ChenInstitute of Genetics, School of Medicine, Zhejiang University, Hangzhou 310058, China. yechency@zju.edu.cn.
Huiling WuDepartment of Plastic Surgery, First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China. whl1616@126.com.
Thomas J FaheyDepartment of Surgery, New York Presbyterian Hospital and Weill Medical College of Cornell University, New York, NY 10021, USA. tjfahey@med.cornell.edu.
Minxin GuanInstitute of Genetics, School of Medicine, Zhejiang University, Hangzhou 310058, China. gminxin88@zju.edu.cn.
Lisong TengDepartment of Surgical Oncology, First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China. lsteng@zju.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear genetic alterations have been widely investigated in papillary thyroid cancer (PTC), however, the characteristics of the mitochondrial genome remain uncertain. We sequenced the entire mitochondrial genome of 66 PTCs, 16 normal thyroid tissues and 376 blood samples of healthy individuals. There were 2508 variations (543 sites) detected in PTCs, among which 33 variations were novel. Nearly half of the PTCs (31/66) had heteroplasmic variations. Among the 31 PTCs, 28 specimens harbored a total of 52 somatic mutations distributed in 44 sites. Thirty-three variations including seven nonsense, 11 frameshift and 15 non-synonymous variations selected by bioinformatic software were regarded as pathogenic. These 33 pathogenic mutations were associated with older age (

Indexed as

Age FactorsCarcinomaCarcinoma, PapillaryCodon, NonsenseFrameshift MutationGene DosageGenome, MitochondrialHaplotypesHumansNeoplasm StagingPhylogenyPolymorphism, Single NucleotideReal-Time Polymerase Chain ReactionRNA, TransferSequence Analysis, DNAThyroid Cancer, PapillaryCodon, NonsenseRNA, Transferhaplogroupmitochondrial DNAmitochondrial DNA copy numberpapillary thyroid cancer

Identifiers

PMID27735863
PMCPMC5085627

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.