Evidence map›Paper›PMID 27734910›Full record

ArticleScientific reports2016

Development of a one-pot assay for screening and identification of Mur pathway inhibitors in Mycobacterium tuberculosis.

Kandasamy Eniyan, Anuradha Kumar, Geetha Vani Rayasam, Andrej Perdih, Urmi Bajpai

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Prospects for Antibacterial Discovery and Development.Journal of the American Chemical Society · 2021
    Article
  6. Article
  7. Article
  8. Review
  9. Molecular Targets Related Drug Resistance Mechanisms in MDR-, XDR-, and TDR-Frontiers in cellular and infection microbiology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Kandasamy EniyanDepartment of Biomedical Science, Acharya Narendra Dev College, University of Delhi, New Delhi 110019, India.
Anuradha KumarInfectious Disease Research Institute, Seattle WA 98102, USA.
Geetha Vani RayasamCSIR-IGIB, South Campus, Mathura road, New Delhi 110025, India.
Andrej PerdihNational Institute of Chemistry, Hajdrihova 19, 1001 Ljubljana, Slovenia.
Urmi BajpaiDepartment of Biomedical Science, Acharya Narendra Dev College, University of Delhi, New Delhi 110019, India.
University of Delhi · INInfectious Disease Research Institute · USInstitute of Genomics and Integrative Biology · INNational Institute of Chemistry · SI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cell wall of Mycobacterium tuberculosis (Mtb) consists of peptidoglycan, arabinogalactan and mycolic acids. The cytoplasmic steps in the peptidoglycan biosynthetic pathway, catalyzed by the Mur (A-F) enzymes, involve the synthesis of UDP-n-acetylmuramyl pentapeptide, a key precursor molecule required for the formation of the peptidoglycan monomeric building blocks. Mur enzymes are indispensable for cell integrity and their lack of counterparts in eukaryotes suggests them to be promising Mtb drug targets. However, the caveat is that most of the current assays utilize a single Mur enzyme, thereby identifying inhibitors against only one of the enzymes. Here, we report development of a one-pot assay that reconstructs the entire Mtb Mur pathway in vitro and has the advantage of eliminating the requirement for nucleotide intermediates in the pathway as substrates. The MurA-MurF enzymes were purified and a one-pot assay was developed through optimization of successive coupled enzyme assays using UDP-n-acetylglucosamine as the initial sugar substrate. The assay is biochemically characterized and optimized for high-throughput screening of molecules that could disrupt multiple targets within the pathway. Furthermore, we have validated the assay by performing it to identify D-Cycloserine and furan-based benzene-derived compounds with known Mur ligase inhibition as inhibitors of Mtb MurE and MurF.

Indexed as

Alkyl and Aryl TransferasesBacterial ProteinsBenzeneBiological AssayCell WallCycloserineEnzyme InhibitorsFuransMycobacterium tuberculosisPeptide SynthasesPeptidoglycanSignal TransductionUridine Diphosphate N-Acetylmuramic AcidAlkyl and Aryl TransferasesBacterial ProteinsBenzeneCycloserineEnzyme InhibitorsfuranFuransPeptide SynthasesPeptidoglycanUDP-N-acetylglucosamine 1-carboxyvinyltransferaseUDP-N-acetylmuramic acid pentapeptideUridine Diphosphate N-Acetylmuramic Acid

Identifiers

PMID27734910
PMCPMC5062083
OpenAlexW2531808057

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.