Evidence map›Paper›PMID 27734894›Full record

ArticleScientific reports2016

Genomic evidence for plant-parasitic nematodes as the earliest Wolbachia hosts.

Amanda M V Brown, Sulochana K Wasala, Dana K Howe, Amy B Peetz, Inga A Zasada, Dee R Denver

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
8.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 71 citations in OpenAlex.

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  15. Discovery of Early-BranchingFrontiers in microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Amanda M V BrownDepartment of Integrative Biology, 3029 Cordley Hall, Oregon State University, Corvallis, OR 97331 USA.
Sulochana K WasalaDepartment of Integrative Biology, 3029 Cordley Hall, Oregon State University, Corvallis, OR 97331 USA.
Dana K HoweDepartment of Integrative Biology, 3029 Cordley Hall, Oregon State University, Corvallis, OR 97331 USA.
Amy B PeetzUSDA-ARS Horticultural Crops Research Laboratory, 3420 NW Orchard Avenue, Corvallis, OR 97330, USA.
Inga A ZasadaUSDA-ARS Horticultural Crops Research Laboratory, 3420 NW Orchard Avenue, Corvallis, OR 97330, USA.
Dee R DenverDepartment of Integrative Biology, 3029 Cordley Hall, Oregon State University, Corvallis, OR 97331 USA.
Oregon State University · USHorticultural Crops Research Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wolbachia, one of the most widespread endosymbionts, is a target for biological control of mosquito-borne diseases (malaria and dengue virus), and antibiotic elimination of infectious filarial nematodes. We sequenced and analyzed the genome of a new Wolbachia strain (wPpe) in the plant-parasitic nematode Pratylenchus penetrans. Phylogenomic analyses placed wPpe as the earliest diverging Wolbachia, suggesting two evolutionary invasions into nematodes. The next branches comprised strains in sap-feeding insects, suggesting Wolbachia may have first evolved as a nutritional mutualist. Genome size, protein content, %GC, and repetitive DNA allied wPpe with mutualistic Wolbachia, whereas gene repertoire analyses placed it between parasite (A, B) and mutualist (C, D, F) groups. Conservation of iron metabolism genes across Wolbachia suggests iron homeostasis as a potential factor in its success. This study enhances our understanding of this globally pandemic endosymbiont, highlighting genetic patterns associated with host changes. Combined with future work on this strain, these genomic data could help provide potential new targets for plant-parasitic nematode control.

Indexed as

Genome, BacterialSymbiosisAnimalsBiological EvolutionDNA, BacterialFemaleGene LibraryGenomicsHomeostasisIn Situ Hybridization, FluorescenceIronLikelihood FunctionsMaleNematodaPhenotypePhylogenyDNA, BacterialIron

Identifiers

PMID27734894
PMCPMC5062116
OpenAlexW2530194599

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.