Evidence map›Paper›PMID 27734633›Full record

ArticlePlant biotechnology journal2017

An (E,E)-α-farnesene synthase gene of soybean has a role in defence against nematodes and is involved in synthesizing insect-induced volatiles.

Jingyu Lin, Dan Wang, Xinlu Chen, Tobias G Köllner, Mitra Mazarei, Hong Guo, Vincent R Pantalone, Prakash Arelli, Charles Neal Stewart, Ningning Wang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 77 citations in OpenAlex.

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  11. Biochemical analysis of the TPS-a subfamily inFrontiers in plant science · 2024
    Article
  12. Review
  13. Article
  14. Article
  15. Functional Characterization of a (International journal of molecular sciences · 2023
    Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Jingyu LinDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
Dan WangDepartment of Plant Biology and Ecology, College of Life Sciences, Nankai University, Tianjin, China.
Xinlu ChenDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
Tobias G KöllnerDepartment of Biochemistry, Max Planck Institute for Chemical Ecology, Jena, Germany.
Mitra MazareiDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
Hong GuoDepartment of Biochemistry, Cellular and Molecular Biology, University of Tennessee, Knoxville, TN, USA.
Vincent R PantaloneDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
Prakash ArelliCrop Genetics Research Unit, USDA-ARS, Jackson, TN, USA.
Charles Neal StewartDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
Ningning WangDepartment of Plant Biology and Ecology, College of Life Sciences, Nankai University, Tianjin, China.
Feng ChenDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
University of Tennessee at Knoxville · USNankai University · CNAgricultural Research Service · USMax Planck Institute for Chemical Ecology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant terpene synthase genes (TPSs) have roles in diverse biological processes. Here, we report the functional characterization of one member of the soybean TPS gene family, which was designated GmAFS. Recombinant GmAFS produced in Escherichia coli catalysed the formation of a sesquiterpene (E,E)-α-farnesene. GmAFS is closely related to (E,E)-α-farnesene synthase gene from apple, both phylogenetically and structurally. GmAFS was further investigated for its biological role in defence against nematodes and insects. Soybean cyst nematode (SCN) is the most important pathogen of soybean. The expression of GmAFS in a SCN-resistant soybean was significantly induced by SCN infection compared with the control, whereas its expression in a SCN-susceptible soybean was not changed by SCN infection. Transgenic hairy roots overexpressing GmAFS under the control of the CaMV 35S promoter were generated in an SCN-susceptible soybean line. The transgenic lines showed significantly higher resistance to SCN, which indicates that GmAFS contributes to the resistance of soybean to SCN. In soybean leaves, the expression of GmAFS was found to be induced by Tetranychus urticae (two-spotted spider mites). Exogenous application of methyl jasmonate to soybean plants also induced the expression of GmAFS in leaves. Using headspace collection combined with gas chromatography-mass spectrometry analysis, soybean plants that were infested with T. urticae were shown to emit a mixture of volatiles with (E,E)-α-farnesene as one of the most abundant constituents. In summary, this study showed that GmAFS has defence roles in both below-ground and above-ground organs of soybean against nematodes and insects, respectively.

Indexed as

AnimalsGene Expression Regulation, PlantGlycine maxInsectaNematodaPlant ProteinsPlants, Genetically ModifiedPyrophosphatasesbeta-farnesene synthasePlant ProteinsPyrophosphatasessesquiterpene synthasetransgenic hairy rootsvolatile

Identifiers

PMID27734633
PMCPMC5362686
OpenAlexW2531425172

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.