ArticleAntonie van Leeuwenhoek2017
Phylogeny of anaerobic fungi (phylum Neocallimastigomycota), with contributions from yak in China.
Article in Antonie van Leeuwenhoek, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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17 citing papers in PubMed.
- Composition and diversity of gastrointestinal tract fungi in finishing bulls fed different medium-chain fatty acid triglycerides.BMC microbiology · 2026Article
- Anaerobic fungi: effective warriors in lignocellulosic biomass degradation and fermentation.FEMS microbiology ecology · 2025Review
- Effect of Growth Media on the Diversity ofMicroorganisms · 2022Article
- Metabolic shift towards increased biohydrogen production during dark fermentation in the anaerobic fungus Neocallimastix cameroonii G341.Biotechnology for biofuels and bioproducts · 2022Article
- Dynamics Changes of Microorganisms Community and Fermentation Quality in Soybean Meal Prepared with Lactic Acid Bacteria andFoods (Basel, Switzerland) · 2022Article
- Characterizing the Alteration in Rumen Microbiome and Carbohydrate-Active Enzymes Profile with Forage of Muskoxen Rumen through Comparative Metatranscriptomics.Microorganisms · 2021Article
- Isolation and Biochemical Characterization of Six Anaerobic Fungal Strains from Zoo Animal Feces.Microorganisms · 2021Article
- Article
- The Present Role and New Potentials of Anaerobic Fungi in Ruminant Nutrition.Journal of fungi (Basel, Switzerland) · 2021Review
- Anaerobic Fungi: Past, Present, and Future.Frontiers in microbiology · 2020Review
- Fungal evolution: diversity, taxonomy and phylogeny of the Fungi.Biological reviews of the Cambridge Philosophical Society · 2019Article
- Molecular Dating of the Emergence of Anaerobic Rumen Fungi and the Impact of Laterally Acquired Genes.mSystems · 2019Article
- Horizontal Gene Transfer as an Indispensable Driver for Evolution of Neocallimastigomycota into a Distinct Gut-Dwelling Fungal Lineage.Applied and environmental microbiology · 2019Article
- Assessment of the Accuracy of High-Throughput Sequencing of the ITS1 Region of Neocallimastigomycota for Community Composition Analysis.Frontiers in microbiology · 2019Article
- Analysis of the Microbial Diversity in the Fecal Material of Giraffes.Current microbiology · 2018Article
- PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities.Frontiers in microbiology · 2017Review
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3 authors.
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Abstract
The phylum Neocallimastigomycota contains eight genera (about 20 species) of strictly anaerobic fungi. The evolutionary relationships of these genera are uncertain due to insufficient sequence data to infer their phylogenies. Based on morphology and molecular phylogeny, thirteen isolates obtained from yak faeces and rumen digesta in China were assigned to Neocallimastix frontalis (nine isolates), Orpinomyces joyonii (two isolates) and Caecomyces sp. (two isolates), respectively. The phylogenetic relationships of the eight genera were evaluated using complete ITS and partial LSU sequences, compared to the ITS1 region which has been widely used in this phylum in the past. Five monophyletic lineages corresponding to six of the eight genera were statistically supported. Isolates of Caecomyces and Cyllamyces were present in a single lineage and could not be separated properly. Members of Neocallimastigomycota with uniflagellate zoospores represented by Piromyces were polyphyletic. The Piromyces-like genus Oontomyces was consistently closely related to the traditional Anaeromyces, and separated the latter genus into two clades. The phylogenetic position of the Piromyces-like genus Buwchfawromyces remained unresolved. Orpinomyces and Neocallimastix, sharing polyflagellate zoospores, were supported as sister genera in the LSU phylogeny. Apparently ITS, specifically ITS1 alone, is not a good marker to resolve the generic affinities of the studied fungi. The LSU sequences are easier to align and appear to work well to resolve generic relationships. This study provides a comparative phylogenetic revision of Neocallimastigomycota isolates known from culture and sequence data.
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