Evidence map›Paper›PMID 27733621›Full record

ArticleMolecular biology of the cell2016

Identification of novel nesprin-1 binding partners and cytoplasmic matrin-3 in processing bodies.

Dipen Rajgor, Jonathan G Hanley, Catherine M Shanahan

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  8. Article
  9. Linking hnRNP Function to ALS and FTD Pathology.Frontiers in neuroscience · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Dipen RajgorCardiovascular Division, King's College London, London SE5 9NU, United Kingdom dr15283@bristol.ac.uk.
Jonathan G HanleyDepartment of Biochemistry, University of Bristol, Bristol BS8 1TD, United Kingdom.
Catherine M ShanahanCardiovascular Division, King's College London, London SE5 9NU, United Kingdom.
King's College London · GBUniversity of Bristol · GB

Funding

British Heart FoundationMedical Research Council
6 · The paper itself

Abstract

Nesprins are highly conserved spectrin repeat-containing scaffold proteins predominantly known to function at the nuclear envelope (NE). However, nesprin isoforms are emerging with localizations and scaffolding functions at sites away from the NE, suggesting their functions are more diverse than originally thought. In this study, we combined nesprin-1 coimmunoprecipitations with mass spectrometry to identify novel nesprin-1 binding partners for isoforms that localize to subcellular compartments beyond the NE. We show that one of these interactors, matrin-3 (matr3), localizes to mRNA processing bodies (PBs), where we have previously shown a nesprin-1 isoform to localize. Furthermore, we show that Matr3 is part of PB mRNP complexes, is a regulator of miRNA-mediated gene silencing, and possibly shuttles to stress granules in stressed cells. More importantly, we identify a new C-terminally truncated Matr3 isoform that is likely to be involved in these functions and PB localization. This study highlights several novel nesprin-1 binding partners and a new function and localization for Matr3 in cytoplasmic RNA granules.

Indexed as

Actin CytoskeletonAlternative SplicingCell Culture TechniquesCytoplasmCytoplasmic GranulesCytoskeletal ProteinsFibroblastsHumansMembrane ProteinsMicrofilament ProteinsNerve Tissue ProteinsNuclear EnvelopeNuclear Matrix-Associated ProteinsNuclear ProteinsProtein BindingProtein IsoformsCytoskeletal ProteinsMATR3 protein, humanMembrane ProteinsMicrofilament ProteinsNerve Tissue ProteinsNuclear Matrix-Associated ProteinsNuclear ProteinsProtein IsoformsRNA-Binding ProteinsSYNE1 protein, human

Identifiers

PMID27733621
PMCPMC5170611
OpenAlexW2531272083

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.