Evidence map›Paper›PMID 27732949›Full record

ArticleOncotarget2016

Gene expression analysis reveals the dysregulation of immune and metabolic pathways in Alzheimer's disease.

Juan Chen, Chuncheng Xie, Yanhong Zhao, Zhiyan Li, Panpan Xu, Lifen Yao

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. A Meta-Analysis of Alzheimer's Disease Brain Transcriptomic Data.Journal of Alzheimer's disease : JAD · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Juan ChenDepartment of Neurology, The First Affiliated Hospital, Harbin Medical University, Harbin, China.
Chuncheng XieDepartment of Neurosurgery, The First Affiliated Hospital, Harbin Medical University, Harbin, China.
Yanhong ZhaoDepartment of Internal Hematology, The First Affiliated Hospital, Harbin Medical University, Harbin, China.
Zhiyan LiDepartment of Neurology, The First Affiliated Hospital, Harbin Medical University, Harbin, China.
Panpan XuDepartment of Neurology, The First Affiliated Hospital, Harbin Medical University, Harbin, China.
Lifen YaoDepartment of Neurology, The First Affiliated Hospital, Harbin Medical University, Harbin, China.
Harbin Medical University · CNFirst Affiliated Hospital of Harbin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, several pathway analyses of genome-wide association studies reported the involvement of metabolic and immune pathways in Alzheimer's disease (AD). Until now, the exact mechanisms of these pathways in AD are still unclear. Here, we conducted a pathway analysis of a whole genome AD case-control expression dataset (n=41, 25 AD cases and 16 controls) from the human temporal cortex tissue. Using the differently expressed AD genes, we identified significant KEGG pathways related to metabolism and immune processes. Using the up- and down- regulated AD gene list, we further found up-regulated AD gene were significantly enriched in immune and metabolic pathways. We further compare the immune and metabolic KEGG pathways from the expression dataset with those from previous GWAS datasets, and found that most of these pathways are shared in both GWAS and expression datasets.

Indexed as

Gene Expression RegulationAlzheimer DiseaseCase-Control StudiesGenetic Predisposition to DiseaseHumansMetabolic Networks and PathwaysAlzheimer’s diseaseexpression dataPathology Sectionpathway analysis

Identifiers

PMID27732949
PMCPMC5341922
OpenAlexW2529615212

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.