Evidence map›Paper›PMID 27732624›Full record

ArticlePloS one2016

Mitochondrial DNA Analyses Indicate High Diversity, Expansive Population Growth and High Genetic Connectivity of Vent Copepods (Dirivultidae) across Different Oceans.

Sabine Gollner, Heiko Stuckas, Terue C Kihara, Stefan Laurent, Sahar Kodami, Pedro Martinez Arbizu

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Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sabine GollnerGerman Center for Marine Biodiversity Research (DZMB), Senckenberg am Meer, Wilhelmshaven, Germany.ORCID http://orcid.org/0000-0001-9322-9258
Heiko StuckasSenckenberg Natural History Collections Dresden, Museum of Zoology, Dresden, Germany.
Terue C KiharaGerman Center for Marine Biodiversity Research (DZMB), Senckenberg am Meer, Wilhelmshaven, Germany.
Stefan LaurentSchool of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Sahar KodamiGerman Center for Marine Biodiversity Research (DZMB), Senckenberg am Meer, Wilhelmshaven, Germany.
Pedro Martinez ArbizuGerman Center for Marine Biodiversity Research (DZMB), Senckenberg am Meer, Wilhelmshaven, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Communities in spatially fragmented deep-sea hydrothermal vents rich in polymetallic sulfides could soon face major disturbance events due to deep-sea mineral mining, such that unraveling patterns of gene flow between hydrothermal vent populations will be an important step in the development of conservation policies. Indeed, the time required by deep-sea populations to recover following habitat perturbations depends both on the direction of gene flow and the number of migrants available for re-colonization after disturbance. In this study we compare nine dirivultid copepod species across various geological settings. We analyze partial nucleotide sequences of the mtCOI gene and use divergence estimates (FST) and haplotype networks to infer intraspecific population connectivity between vent sites. Furthermore, we evaluate contrasting scenarios of demographic population expansion/decline versus constant population size (using, for example, Tajima's D). Our results indicate high diversity, population expansion and high connectivity of all copepod populations in all oceans. For example, haplotype diversity values range from 0.89 to 1 and FST values range from 0.001 to 0.11 for Stygiopontius species from the Central Indian Ridge, Mid Atlantic Ridge, East Pacific Rise, and Eastern Lau Spreading Center. We suggest that great abundance and high site occupancy by these species favor high genetic diversity. Two scenarios both showed similarly high connectivity: fast spreading centers with little distance between vent fields and slow spreading centers with greater distance between fields. This unexpected result may be due to some distinct frequency of natural disturbance events, or to aspects of individual life histories that affect realized rates of dispersal. However, our statistical performance analyses showed that at least 100 genomic regions should be sequenced to ensure accurate estimates of migration rate. Our demography parameters demonstrate that dirivultid populations are generally large and continuously undergoing population growth. Benthic and pelagic species abundance data support these findings.

Indexed as

AnimalsCopepodaDNA, MitochondrialElectron Transport Complex IVGenetics, PopulationGenetic VariationHaplotypesMicroscopy, ConfocalMitochondriaOceans and SeasPhylogenyPopulation GrowthSequence Analysis, DNADNA, MitochondrialElectron Transport Complex IV

Identifiers

PMID27732624
PMCPMC5061364

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.