Evidence map›Paper›PMID 27730518›Full record

ArticleRice (New York, N.Y.)2016

Molecular and Bioinformatic Characterization of the Rice ROOT UV-B SENSITIVE Gene Family.

Ning Yu, Yaping Liang, Xinxiang Peng, Xuewen Hou

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. microPublication biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ning YuResearch Center of Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China.
Yaping LiangResearch Center of Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China.
Xinxiang PengResearch Center of Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China.
Xuewen HouResearch Center of Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China. hxw1969@scau.edu.cn.ORCID http://orcid.org/0000-0002-6448-5292
South China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundROOT UV-B SENSITIVE (RUS) genes exist in most eukaryotic organisms, and encode proteins that contain a DUF647 (domain of unknown function 647). Although the RUS genes are known to play essential roles in Arabidopsis seedling development, their precise functions are not well understood in other plants, including rice.

findingsIn this study, six OsRUS genes were cloned from rice root and leaf cDNA libraries. Our analysis showed that the sequence and open reading frame of cloned OsRUS3 cDNA differs from the predictions reported in the RAP-DB and RGAP databases. Public microarray, MPSS, and EST databases were used to analyze the expression profiles of the six OsRUS genes. Expression profiles for all OsRUS genes at different rice developmental stages were also analyzed by qRT-PCR. The signal peptide, GPI-anchor, transmembrane domain and subcellular localization of OsRUS proteins were predicted by various bioinformatics tools. Furthermore OsRUS1 was determined to be localized to the chloroplast by a protoplast experiment.

conclusionsAll the characterization of the OsRUS family generated from this study will provide a crucial foundation from which to further dissect how OsRUS genes function in rice development.

Indexed as

DUF647Expression profileOryza sativaROOT UV-B SENSITIVESubcellular localization

Identifiers

PMID27730518
PMCPMC5059228
OpenAlexW2531399530

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.