Evidence map›Paper›PMID 27729912›Full record

ArticleFrontiers in immunology2016

Significant Differences in Physicochemical Properties of Human Immunoglobulin Kappa and Lambda CDR3 Regions.

Catherine L Townsend, Julie M J Laffy, Yu-Chang Bryan Wu, Joselli Silva O'Hare, Victoria Martin, David Kipling, Franca Fraternali, Deborah K Dunn-Walters

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 78 citations in OpenAlex.

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  12. Hybrid Mass Spectrometry Applied across the Production of Antibody Biotherapeutics.Journal of the American Society for Mass Spectrometry · 2025
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  15. Building Representation Learning Models for Antibody Comprehension.Cold Spring Harbor perspectives in biology · 2024
    Review
  16. Article
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  18. Best practices in assessing cardiac proteinAmerican journal of physiology. Heart and circulatory physiology · 2023
    Article
  19. Article
  20. Catalase Activity of IgGs of Patients Infected with SARS-CoV-2.International journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Catherine L TownsendDepartment of Immunobiology, King's College London , London , UK.
Julie M J LaffyRandall Division of Cell and Molecular Biophysics, King's College London , London , UK.
Yu-Chang Bryan WuDepartment of Immunobiology, King's College London , London , UK.
Joselli Silva O'HareDepartment of Immunobiology, King's College London , London , UK.
Victoria MartinDepartment of Immunobiology, King's College London , London , UK.
David KiplingDivision of Cancer and Genetics, School of Medicine, Cardiff University , Cardiff , UK.
Franca FraternaliRandall Division of Cell and Molecular Biophysics, King's College London , London , UK.
Deborah K Dunn-WaltersDepartment of Immunobiology, King's College London, London, UK; Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK.
King's College London · GBCardiff University · GB

Funding

Medical Research Council MR/L01257X/1Medical Research Council MR/L01257X/2The Dunhill Medical Trust R279/0213
6 · The paper itself

Abstract

Antibody variable regions are composed of a heavy and a light chain, and in humans, there are two light chain isotypes: kappa and lambda. Despite their importance in receptor editing, the light chain is often overlooked in the antibody literature, with the focus being on the heavy chain complementarity-determining region (CDR)-H3 region. In this paper, we set out to investigate the physicochemical and structural differences between human kappa and lambda light chain CDR regions. We constructed a dataset containing over 29,000 light chain variable region sequences from IgM-transcribing, newly formed B cells isolated from human bone marrow and peripheral blood. We also used a published human naïve dataset to investigate the CDR-H3 properties of heavy chains paired with kappa and lambda light chains and probed the Protein Data Bank to investigate the structural differences between kappa and lambda antibody CDR regions. We found that kappa and lambda light chains have very different CDR physicochemical and structural properties, whereas the heavy chains with which they are paired do not differ significantly. We also observed that the mean CDR3 N nucleotide addition in the kappa, lambda, and heavy chain gene rearrangements are correlated within donors but can differ between donors. This indicates that terminal deoxynucleotidyl transferase may work with differing efficiencies between different people but the same efficiency in the different classes of immunoglobulin chain within one person. We have observed large differences in the physicochemical and structural properties of kappa and lambda light chain CDR regions. This may reflect different roles in the humoral immune response.

Indexed as

antibodyCDR3immunoglobulinkappalambdalight chainsN nucleotide additionTdT

Identifiers

PMID27729912
PMCPMC5037968
OpenAlexW2527224136

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.