Evidence map›Paper›PMID 27729523›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Germline replications and somatic mutation accumulation are independent of vegetative life span in Arabidopsis.

J Matthew Watson, Alexander Platzer, Anita Kazda, Svetlana Akimcheva, Sona Valuchova, Viktoria Nizhynska, Magnus Nordborg, Karel Riha

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
21.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 116 citations in OpenAlex.

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  11. Male Germ Cell Specification in Plants.International journal of molecular sciences · 2024
    Review
  12. Article
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  17. Review
  18. Article
  19. DNA methylation dynamics during germline development.Journal of integrative plant biology · 2022
    Review
  20. Sorting of mitochondrial and plastid heteroplasmy inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

J Matthew WatsonGregor Mendel Institute of Plant Molecular Biology, Austrian Academy of Sciences, Vienna Biocenter, 1030 Vienna, Austria.
Alexander PlatzerGregor Mendel Institute of Plant Molecular Biology, Austrian Academy of Sciences, Vienna Biocenter, 1030 Vienna, Austria.
Anita KazdaGregor Mendel Institute of Plant Molecular Biology, Austrian Academy of Sciences, Vienna Biocenter, 1030 Vienna, Austria.
Svetlana AkimchevaGregor Mendel Institute of Plant Molecular Biology, Austrian Academy of Sciences, Vienna Biocenter, 1030 Vienna, Austria.
Sona ValuchovaCentral European Institute of Technology, Masaryk University, 612 65 Brno, Czech Republic.
Viktoria NizhynskaGregor Mendel Institute of Plant Molecular Biology, Austrian Academy of Sciences, Vienna Biocenter, 1030 Vienna, Austria.
Magnus NordborgGregor Mendel Institute of Plant Molecular Biology, Austrian Academy of Sciences, Vienna Biocenter, 1030 Vienna, Austria.ORCID 0000-0001-7178-9748
Karel RihaGregor Mendel Institute of Plant Molecular Biology, Austrian Academy of Sciences, Vienna Biocenter, 1030 Vienna, Austria; Central European Institute of Technology, Masaryk University, 612 65 Brno, Czech Republic karel.riha@ceitec.muni.cz.
Gregor Mendel Institute of Molecular Plant Biology · ATCentral European Institute of Technology · CZ

Funding

European Research Council 268962
6 · The paper itself

Abstract

In plants, gametogenesis occurs late in development, and somatic mutations can therefore be transmitted to the next generation. Longer periods of growth are believed to result in an increase in the number of cell divisions before gametogenesis, with a concomitant increase in mutations arising due to replication errors. However, there is little experimental evidence addressing how many cell divisions occur before gametogenesis. Here, we measured loss of telomeric DNA and accumulation of replication errors in Arabidopsis with short and long life spans to determine the number of replications in lineages leading to gametes. Surprisingly, the number of cell divisions within the gamete lineage is nearly independent of both life span and vegetative growth. One consequence of the relatively stable number of replications per generation is that older plants may not pass along more somatically acquired mutations to their offspring. We confirmed this hypothesis by genomic sequencing of progeny from young and old plants. This independence can be achieved by hierarchical arrangement of cell divisions in plant meristems where vegetative growth is primarily accomplished by expansion of cells in rapidly dividing meristematic zones, which are only rarely refreshed by occasional divisions of more quiescent cells. We support this model by 5-ethynyl-2'-deoxyuridine retention experiments in shoot and root apical meristems. These results suggest that stem-cell organization has independently evolved in plants and animals to minimize mutations by limiting DNA replication.

Indexed as

ArabidopsisDiploidyDNA ReplicationGene Expression Regulation, PlantGenome, PlantGerm CellsMeristemMutationMutation AccumulationPlant CellsPlant RootsPlant ShootsPlant StemsSequence Analysis, DNAgermlinemismatch repairmutation rateshoot apical meristemtelomeres

Identifiers

PMID27729523
PMCPMC5087024
OpenAlexW2530506124

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.